RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ATG16L1Q676U5 607 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 TTC19Q6DKK2 380 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 ENPP7Q6UWV6 458 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 DHRS13Q6UX07 377 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 UNC5DQ6UXZ4 953 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 FAM83HQ6ZRV2 1179 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 FRA10AC1Q70Z53 315 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 RABEPKQ7Z6M1 372 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 CFAP206Q8IYR0 622 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 ZNF843Q8N446 348 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 PDPRQ8NCN5 879 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 FBXO15Q8NCQ5 510 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 ZNF75CPQ92670 426 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 L3HYPDHQ96EM0 354 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 KLHDC7BQ96G42 594 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 FOPNLQ96NB1 174 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 ZNF317Q96PQ6 595 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 UBL7Q96S82 380 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 MANSC1Q9H8J5 431 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 CARS2Q9HA77 564 aaKnown RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 CYP4F12Q9HCS2 524 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 TM9SF3Q9HD45 589 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 MRPL40Q9NQ50 206 aaKnown RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 AASDHPPTQ9NRN7 309 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 TRNAU1APQ9NX07 287 aaKnown RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 EIF2B4Q9UI10 523 aaKnown RBP11.15□□□□□ -0.62
SLIRP-212ENST00000613856 ADAMTS6Q9UKP5 1117 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 PRKAB1Q9Y478 270 aa11.15□□□□□ -0.62
SLIRP-212ENST00000613856 ZNF462Q96JM2 2506 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 A0A1B0GTW7 788 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 WDR91A4D1P6 747 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 NEMP2A6NFY4 417 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 TMEM114B3SHH9 223 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 SUPT3HB4E1H0 165 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 FFAR2O15552 330 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 SNNO75324 88 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 SUPT3HO75486 399 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 RASGRP1O95267 797 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 CATP04040 527 aaKnown RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 NEFHP12036 1026 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 ACP5P13686 325 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 CYP2A7P20853 494 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 ACADLP28330 430 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 PDHA2P29803 388 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 CSNK1EP49674 416 aaKnown RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 HK3P52790 923 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 ALDH18A1P54886 795 aaKnown RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 EIF2B5Q13144 721 aaKnown RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 FZD2Q14332 565 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 TGFBIQ15582 683 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 PHKG1Q16816 387 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 METTL2BQ6P1Q9 378 aaKnown RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 DBX2Q6ZNG2 339 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 UBE2R2Q712K3 238 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 CHST15Q7LFX5 561 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 PARGQ86W56 976 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 FBXO39Q8N4B4 442 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 RHBDD1Q8TEB9 315 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 UBTD2Q8WUN7 234 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 SKA2Q8WVK7 121 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 DLG3Q92796 817 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 CHMP6Q96FZ7 201 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 C1QTNF3Q9BXJ4 246 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 PRORYQ9H606 182 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 PARVBQ9HBI1 364 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 KLC4Q9NSK0 619 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 NCKIPSDQ9NZQ3 722 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 FAM8A1Q9UBU6 413 aa11.14□□□□□ -0.63
SLIRP-212ENST00000613856 TSR3Q9UJK0 312 aaKnown RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 PNMA8BQ9ULN7 279 aaPredicted RBP11.14□□□□□ -0.63
SLIRP-212ENST00000613856 ARHGEF17Q96PE2 2063 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 ARHGEF33A8MVX0 844 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 TCP11X1B4DZS4 312 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 VILLO15195 856 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 ATXN7O15265 892 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 NPHS1O60500 1241 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 SNX2O60749 519 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 SNUPNO95149 360 aaKnown RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 TNFP01375 233 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 S100BP04271 92 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 WNT1P04628 370 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 SLC35G4P0C7Q5 338 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 GFAPP14136 432 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 GNSP15586 552 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 IDSP22304 550 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 EIF2S3P41091 472 aaKnown RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 BLKP51451 505 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 HERVK_113P63132 956 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 CBX1P83916 185 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 OCRLQ01968 901 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 BST1Q10588 318 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 SETDB1Q15047 1291 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 KIF19Q2TAC6 998 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 SULT1C3Q6IMI6 304 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 CAPRIN2Q6IMN6 1127 aaKnown RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 TTC23LQ6PF05 361 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 WASH2PQ6VEQ5 465 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 TCAIMQ8N3R3 496 aa11.13□□□□□ -0.63
SLIRP-212ENST00000613856 PTGR2Q8N8N7 351 aaPredicted RBP11.13□□□□□ -0.63
SLIRP-212ENST00000613856 PPP1R14CQ8TAE6 165 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms