RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 IRAK4Q9NWZ3 460 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 EBF1Q9UH73 591 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 TMCO1Q9UM00 188 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 PPT2Q9UMR5 302 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 PCDHB3Q9Y5E6 796 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 U3KQV3 271 aa13.75□□□□□ -0.21
PCDHGA3-202ENST00000612467 KIAA1671Q9BY89 1806 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZBBXA8MT70 800 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLDN9O95484 217 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ANXA5P08758 320 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 GGT1P19440 569 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 METAP1P53582 386 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 USP39Q53GS9 565 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 TMTC4Q5T4D3 741 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ANKRD26P1Q6NSI1 321 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 USP45Q70EL2 814 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 BPIFB1Q8TDL5 484 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ING5Q8WYH8 240 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 APOLD1Q96LR9 279 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 EXD2Q9NVH0 621 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 SMPD3Q9NY59 655 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ADGRE2Q9UHX3 823 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 CDC14AQ9UNH5 594 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ITM2BQ9Y287 266 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 PCDHB14Q9Y5E9 798 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 WNT6Q9Y6F9 365 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZNF106Q9H2Y7 1883 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ARNTLO00327 626 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 IFRD1O00458 451 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 GSTA4O15217 222 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ANXA6P08133 673 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 MYF6P23409 242 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 SHMT2P34897 504 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 MTHFRP42898 656 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 PREPP48147 710 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLCN2P51788 898 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 GPR33Q49SQ1 333 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 PLPP4Q5VZY2 271 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZNF551Q7Z340 670 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 TBC1D21Q8IYX1 336 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 CPXM2Q8N436 756 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 NCLNQ969V3 563 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ECHDC3Q96DC8 303 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZSWIM3Q96MP5 696 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 MUS81Q96NY9 551 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 VCX3AQ9NNX9 186 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 KCTD5Q9NXV2 234 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 VPS4AQ9UN37 437 aa13.74□□□□□ -0.21
PCDHGA3-202ENST00000612467 AGAP14A8MT82 685 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 PRKD3O94806 890 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 SPINT3P49223 89 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 RPS6KA3P51812 740 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 MESP2Q0VG99 397 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ABRQ12979 859 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 LRRC26Q2I0M4 334 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 CARD16Q5EG05 197 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 LY6G5CQ5SRR4 150 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 LPCAT2Q7L5N7 544 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 TMEM179BQ7Z7N9 219 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 DHRSXQ8N5I4 330 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZNF548Q8NEK5 533 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 OR2A12Q8NGT7 310 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 NTMT1Q9BV86 223 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 SEZ6LQ9BYH1 1024 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 NAA50Q9GZZ1 169 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ANTXRLA6NF34 631 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 EBLN1P0CF75 366 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 TYRP14679 529 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 AOAHP28039 575 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 POLR2IP36954 125 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ALDH3B2P48448 385 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 TTLL9Q3SXZ7 439 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ARSIQ5FYB1 569 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 PAPD5Q8NDF8 572 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 PNPT1Q8TCS8 783 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 USP7Q93009 1102 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ITCHQ96J02 903 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ZBTB18Q99592 522 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 DCUN1D5Q9BTE7 237 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 CLMPQ9H6B4 373 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 PRM3Q9NNZ6 103 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 ASAH2Q9NR71 780 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 C1orf109Q9NX04 203 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 PTTG2Q9NZH5 202 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 HS3ST2Q9Y278 367 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 INVSQ9Y283 1065 aa13.73□□□□□ -0.21
PCDHGA3-202ENST00000612467 FADS2P1A8MWK0 482 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 LEFTY1O75610 366 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CDH1P12830 882 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 PBLDP30039 288 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 HALP42357 657 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 PIGFQ07326 219 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 AASDHQ4L235 1098 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 CACHD1Q5VU97 1274 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 LILRA6Q6PI73 481 aa13.72□□□□□ -0.21
PCDHGA3-202ENST00000612467 TRIM46Q7Z4K8 759 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms