RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 CLMPQ9H6B4 373 aa14.8□□□□□ -0.04
PCDHGB1-202ENST00000611598 MAGIXQ9H6Y5 334 aa14.8□□□□□ -0.04
PCDHGB1-202ENST00000611598 SIAEQ9HAT2 523 aa14.8□□□□□ -0.04
PCDHGB1-202ENST00000611598 ABCB10Q9NRK6 738 aa14.8□□□□□ -0.04
PCDHGB1-202ENST00000611598 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.8□□□□□ -0.04
PCDHGB1-202ENST00000611598 GREB1Q4ZG55 1949 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 MOXD2PA6NHM9 499 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 TLR5O60602 858 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 SEC22BO75396 215 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 JUNDP17535 347 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 TACR2P21452 398 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 FCGRTP55899 365 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 SLC14A1Q13336 389 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 RFX4Q33E94 735 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 SHQ1Q6PI26 577 aaKnown RBP14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 LINC00299Q6ZSB3 139 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 ZNF551Q7Z340 670 aaPredicted RBP14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 PLPP6Q8IY26 295 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 OR52E4Q8NGH9 312 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 MTFMTQ96DP5 389 aaKnown RBP14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 LGALS12Q96DT0 336 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 PSKH2Q96QS6 385 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 CPPED1Q9BRF8 314 aaPredicted RBP14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 ACOT13Q9NPJ3 140 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 RASSF1Q9NS23 344 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 C1orf109Q9NX04 203 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 MYO1GB0I1T2 1018 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 ZNF682O95780 498 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 TYMPP19971 482 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 SLC6A4P31645 630 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 CAPN13Q6MZZ7 669 aaPredicted RBP14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 FKBP9P1Q75LS8 142 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 CALHM3Q86XJ0 350 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 RGL4Q8IZJ4 473 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 APOL5Q9BWW9 433 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 VPS9D1Q9Y2B5 631 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 TPRKBQ9Y3C4 175 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 GMPPBQ9Y5P6 360 aa14.79□□□□□ -0.04
PCDHGB1-202ENST00000611598 FAM220BPB1ANY3 271 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 PFDN6O15212 129 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 STX7O15400 261 aaKnown RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 RGS14O43566 566 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 IL6P05231 212 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 KRT20P35900 424 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 TGFBR2P37173 567 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 EIF2DP41214 584 aaKnown RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 CDKN2CP42773 168 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ALDH7A1P49419 539 aaKnown RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ST13P50502 369 aaKnown RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 HUNKP57058 714 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 TAF10Q12962 218 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ZNF280BQ86YH2 543 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 CCDC71Q8IV32 467 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 RHOXF1Q8NHV9 184 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 DACH2Q96NX9 599 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 TNKS2Q9H2K2 1166 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 RMND5AQ9H871 391 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 SERHLQ9NQF3 203 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 UBA2Q9UBT2 640 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ZNF490Q9ULM2 529 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 TNPO3Q9Y5L0 923 aaKnown RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 RAI2Q9Y5P3 530 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 hCG_2039718K7EN88 272 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 PER2O15055 1255 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 IGLV3-27P01718 113 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 CD36P16671 472 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 CR2P20023 1033 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 CA5AP35218 305 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 GNPDA1P46926 289 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 NKX2-5P52952 324 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 DEPDC1Q5TB30 811 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ATG9BQ674R7 924 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ADAMTSL2Q86TH1 951 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 PLD3Q8IV08 490 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 SLC22A15Q8IZD6 547 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 SETD9Q8NE22 299 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 LKAAEAR1Q8TD35 194 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 SH3GL1Q99961 368 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ADAM2Q99965 735 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 P2RY12Q9H244 342 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 LRTM1Q9HBL6 345 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 ZBTB20Q9HC78 741 aaPredicted RBP14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 PCDHB8Q9UN66 801 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 DHRS7Q9Y394 339 aa14.78□□□□□ -0.04
PCDHGB1-202ENST00000611598 PLXNA3P51805 1871 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 RGS10O43665 173 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 FAM20BO75063 409 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 ZNF623O75123 536 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 PRAMEF12O95522 483 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 ESR1P03372 595 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 S100BP04271 92 aaPredicted RBP14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 CD9P21926 228 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 PSMA3P25788 255 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 HOXA9P31269 272 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 GSSP48637 474 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 SEPHS1P49903 392 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 CLCN4P51793 760 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 PPP5CP53041 499 aa14.77□□□□□ -0.04
PCDHGB1-202ENST00000611598 RPS24P62847 133 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms