RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FAM189BP81408 668 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 LAPTM5Q13571 262 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 RUNX3Q13761 415 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 MINDY4Q4G0A6 757 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 KLHDC10Q6PID8 442 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 THOC6Q86W42 341 aaKnown RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 TREML1Q86YW5 311 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PRSS58Q8IYP2 241 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 KIAA2013Q8IYS2 634 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ANKLE1Q8NAG6 615 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SAMD11Q96NU1 681 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SLC38A3Q99624 504 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 MGME1Q9BQP7 344 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 PRRG3Q9BZD7 231 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 C3orf14Q9HBI5 128 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 MRPS33Q9Y291 106 aaKnown RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SLC9A8Q9Y2E8 581 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 GMPPBQ9Y5P6 360 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 LYVE1Q9Y5Y7 322 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 H3BQ06 376 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 DNAJA2O60884 412 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CCNDBP1O95273 360 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 LATS1O95835 1130 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 G6PDP11413 515 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 MTHFD1P11586 935 aaKnown RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CCNFP41002 786 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CHN2P52757 468 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 STX4Q12846 297 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 HEPACAMQ14CZ8 416 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 KDELC1Q6UW63 502 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF605Q86T29 641 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 HEATR4Q86WZ0 1026 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 CAMKK1Q8N5S9 505 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 FAM47BQ8NA70 645 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ANKRD49Q8WVL7 239 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 LRTOMTQ8WZ04 291 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 RORBQ92753 470 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 ROPN1LQ96C74 230 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SLC39A13Q96H72 371 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 DUSP26Q9BV47 211 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 RSPH9Q9H1X1 276 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 OR51B5Q9H339 312 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 RETREG1Q9H6L5 497 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 EBF2Q9HAK2 575 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 MRPS30Q9NP92 439 aaKnown RBP7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SAGE1Q9NXZ1 904 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 SEC14L3Q9UDX4 400 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 LZTS1Q9Y250 596 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 TPRKBQ9Y3C4 175 aa7.12□□□□□ -1.27
CSDE1-218ENST00000610726 NUP205Q92621 2012 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 KNTC1P50748 2209 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 A0A087WXM4 84 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 FAM234BA2RU67 622 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 DRGXA6NNA5 263 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 MAGEB17A8MXT2 336 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 HHLA1C9JL84 531 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 E7ENX8 843 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 MGRN1O60291 552 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 KLF8O95600 359 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 KLKB1P03952 638 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 MYCLP1P12525 358 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 MEF2AQ02078 507 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 LHX8Q68G74 356 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 EIF3MQ7L2H7 374 aaKnown RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 SCML4Q8N228 414 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 C11orf65Q8NCR3 313 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 OR52J3Q8NH60 311 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 ZNF607Q96SK3 696 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 EFCAB11Q9BUY7 163 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 CRISPLD1Q9H336 500 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 NME7Q9Y5B8 376 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 PTGDR2Q9Y5Y4 395 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 COL24A1Q17RW2 1714 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 LAMB2P55268 1798 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 LINC00854A0A1B0GVQ3 168 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 KRT87PA6NCN2 255 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 TNFRSF10BO14763 440 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 CEBPBP17676 345 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 ITGAXP20702 1163 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 NT5EP21589 574 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 PAICSP22234 425 aaKnown RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 MTHFRP42898 656 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 SIM2Q14190 667 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 NADSYN1Q6IA69 706 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 OR4F3Q6IEY1 312 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 PDE12Q6L8Q7 609 aaKnown RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 TMEM214Q6NUQ4 689 aaKnown RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 SLC2A7Q6PXP3 512 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 C6orf89Q6UWU4 347 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 GALNT5Q7Z7M9 940 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 PIANPQ8IYJ0 282 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 CBR4Q8N4T8 237 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 GLB1L3Q8NCI6 653 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-218ENST00000610726 OR4E2Q8NGC2 313 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 WDR60Q8WVS4 1066 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 SCRN2Q96FV2 425 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 RANBP9Q96S59 729 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 SPATA5L1Q9BVQ7 753 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 TTLL2Q9BWV7 592 aa7.11□□□□□ -1.27
CSDE1-218ENST00000610726 INTS7Q9NVH2 962 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms