RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 SLC25A51Q9H1U9 297 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 C8GP07360 202 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ITGB5P18084 799 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ARL3P36405 182 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 NCBP2P52298 156 aaKnown RBP eCLIP12.85□□□□□ -0.353e-10■■■■■ 40.4
USP6NL-205ENST00000609104 ERVK-21P61565 698 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 NFKB2Q00653 900 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 TBC1D25Q3MII6 688 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 OGFRL1Q5TC84 451 aaPredicted RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 ZBED6CLQ96FA7 236 aaPredicted RBP12.85□□□□□ -0.35
USP6NL-205ENST00000609104 HSD17B14Q9BPX1 270 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 TRPV4Q9HBA0 871 aa12.85□□□□□ -0.35
USP6NL-205ENST00000609104 CD2P06729 351 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 NPTX1Q15818 432 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 PDLIM1O00151 329 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 TLX3O43711 291 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 C1QTNF8P60827 252 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 UBXN11Q5T124 520 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 CEP68Q76N32 757 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 OR2L8Q8NGY9 312 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 RFT1Q96AA3 541 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 FAM163AQ96GL9 167 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 BAZ2AQ9UIF9 1905 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 LHCGRP22888 699 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 OR7D4Q8NG98 312 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 FZD10Q9ULW2 581 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 KHKP50053 298 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 TSTD2Q5T7W7 516 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 USP50Q70EL3 339 aaPredicted RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 KLHL36Q8N4N3 616 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 GPR151Q8TDV0 419 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 PSMG2Q969U7 264 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 DPEP3Q9H4B8 488 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 PRKD3O94806 890 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 MTHFD1P11586 935 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 RHOQP17081 205 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 CASP7P55210 303 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 CRB2Q5IJ48 1285 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 PCDHGB7Q9Y5F8 929 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 CCRL2O00421 344 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 EI24O14681 340 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 BPNT1O95861 308 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 RPS14P62263 151 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 SEMG2Q02383 582 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 OSBPL7Q9BZF2 842 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 MAP2K5Q13163 448 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 SLC38A3Q99624 504 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 RC3H2Q9HBD1 1191 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 LYARQ9NX58 379 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 MYO18AQ92614 2054 aaKnown RBP12.84□□□□□ -0.35
USP6NL-205ENST00000609104 FGF19O95750 216 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 NXPE2Q96DL1 559 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 ACOX3O15254 700 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 B3GALT2O43825 422 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 LCN9Q8WX39 176 aa12.84□□□□□ -0.35
USP6NL-205ENST00000609104 ZNF20P17024 532 aa12.83□□□□□ -0.35
USP6NL-205ENST00000609104 NRLP54845 237 aa12.83□□□□□ -0.35
USP6NL-205ENST00000609104 C1orf109Q9NX04 203 aa12.83□□□□□ -0.35
USP6NL-205ENST00000609104 PPLO60437 1756 aa12.83□□□□□ -0.35
USP6NL-205ENST00000609104 ERCC6L2Q5T890 1561 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 AKAP8O43823 692 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 CILPO75339 1184 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 HSD11B1P28845 292 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 CSTF2P33240 577 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 PRKCDQ05655 676 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 GXYLT1Q4G148 440 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 EIPR1Q53HC9 387 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 FAM76BQ5HYJ3 339 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 CDKL4Q5MAI5 379 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 GRHL3Q8TE85 626 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 LRRC58Q96CX6 371 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 RPL10LQ96L21 214 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 FAM83DQ9H4H8 585 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 GDAP2Q9NXN4 497 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 DEC1Q9P2X7 70 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 VWDEQ8N2E2 1590 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 SCARB2Q14108 478 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 ERI1Q8IV48 349 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 CCDC107Q8WV48 283 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 TRMT61BQ9BVS5 477 aaKnown RBP12.83□□□□□ -0.36
USP6NL-205ENST00000609104 DNAJB9Q9UBS3 223 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 NR2E1Q9Y466 385 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 SYCE2Q6PIF2 218 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 KLK6Q92876 244 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 PCED1BQ96HM7 432 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 SDCBP2Q9H190 292 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 PRPS2P11908 318 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 ADAM15Q13444 863 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 EHD1Q9H4M9 534 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 AMBNQ9NP70 447 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 EDNRAP25101 427 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 ACSBG2Q5FVE4 666 aa12.83□□□□□ -0.36
USP6NL-205ENST00000609104 SPAG16Q8N0X2 631 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms