RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TRIM23P36406 574 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ETV6P41212 452 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 MVKQ03426 396 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 KCNC3Q14003 757 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 GBX1Q14549 363 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ZNF79Q15937 498 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ANKRD54Q6NXT1 300 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 TRILQ7L0X0 811 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CHMP1BQ7LBR1 199 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ADGRG3Q86Y34 549 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 KRT73Q86Y46 540 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CARNMT1Q8N4J0 409 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 DTWD1Q8N5C7 304 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CELF6Q96J87 481 aaKnown RBP12.31□□□□□ -0.44
CTCFL-218ENST00000608440 LGMNQ99538 433 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 TEKT3Q9BXF9 490 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 BCL2L14Q9BZR8 327 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 IL1RAPQ9NPH3 570 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 VPS9D1Q9Y2B5 631 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 NT5C1B-RDH14C9J2C7 533 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 OLFM2O95897 454 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CD9P21926 228 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 MAOBP27338 520 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 PSMB4P28070 264 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 PPP3CCP48454 512 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ARHGDIBP52566 201 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CRISP3P54108 245 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 SNRPFP62306 86 aaKnown RBP12.31□□□□□ -0.44
CTCFL-218ENST00000608440 RPA4Q13156 261 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 MAB21L1Q13394 359 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 NKG7Q16617 165 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 SPANXN3Q5MJ09 141 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 PLET1Q6UQ28 207 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 KCNMB4Q86W47 210 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 XYLT1Q86Y38 959 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 LAX1Q8IWV1 398 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 DCP1BQ8IZD4 617 aaKnown RBP12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ZNF431Q8TF32 576 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CHURC1Q8WUH1 139 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 C19orf60Q96EN9 201 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ZNF668Q96K58 619 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ADPGKQ9BRR6 497 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 COPS4Q9BT78 406 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 TMEM168Q9H0V1 697 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ASB7Q9H672 318 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 TMEM5Q9Y2B1 443 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CITO14578 2027 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 FABP7O15540 132 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 KIAA0513O60268 411 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CST3P01034 146 aaPredicted RBP12.31□□□□□ -0.44
CTCFL-218ENST00000608440 SERPINF2P08697 491 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 JUNDP17535 347 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 HLA-DMAP28067 261 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 GPC1P35052 558 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 KPNA2P52292 529 aaKnown RBP12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ABATP80404 500 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 PTPRCAPQ14761 206 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 LTB4RQ15722 352 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 HKDC1Q2TB90 917 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 TMPRSS11AQ6ZMR5 421 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 C17orf107Q6ZR85 190 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 SULF1Q8IWU6 871 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 GPALPP1Q8IXQ4 340 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 DNAAF3Q8N9W5 541 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 SLC9A7Q96T83 725 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 SLC6A15Q9H2J7 730 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CISHQ9NSE2 258 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 CATSPERZQ9NTU4 200 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 SLC39A1Q9NY26 324 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 TRAPPC4Q9Y296 219 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 ACOT9Q9Y305 439 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 GMPPBQ9Y5P6 360 aa12.31□□□□□ -0.44
CTCFL-218ENST00000608440 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 ASB14A6NK59 587 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 RRASP10301 218 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 MLNP12872 115 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 PDGFRAP16234 1089 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 PTPRAP18433 802 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 SSTR2P30874 369 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 SSTR4P31391 388 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 MYL6P60660 151 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 DMP1Q13316 513 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-218ENST00000608440 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
CTCFL-218ENST00000608440 FAM183BPQ6ZVS7 135 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 SNX20Q7Z614 316 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 CEP97Q8IW35 865 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 BLOC1S5Q8TDH9 187 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 BSNDQ8WZ55 320 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 ATOH1Q92858 354 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-218ENST00000608440 HYLS1Q96M11 299 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 PPP1R16BQ96T49 567 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 APOL2Q9BQE5 337 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 CDCP1Q9H5V8 836 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 GALNT9Q9HCQ5 603 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 DYRK4Q9NR20 520 aa12.3□□□□□ -0.44
CTCFL-218ENST00000608440 TMEFF2Q9UIK5 374 aaPredicted RBP12.3□□□□□ -0.44
CTCFL-218ENST00000608440 FEM1BQ9UK73 627 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms