RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 TXLNBQ8N3L3 684 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 ZADH2Q8N4Q0 377 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 UBL4BQ8N7F7 174 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 ELMO1Q92556 727 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 MRFAP1L1Q96HT8 127 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 XKR8Q9H6D3 395 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 IL1RAPL1Q9NZN1 696 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 MAP10Q9P2G4 905 aa17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 PTRH2Q9Y3E5 179 aaKnown RBP17.19■□□□□ 0.34
SHKBP1-227ENST00000602011 SLC5A10A0PJK1 596 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 WIPF3A6NGB9 483 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 MIF4GDA9UHW6 222 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 ONECUT2O95948 504 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 ALBP02768 609 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 CBSLP0DN79 551 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 MSNP26038 577 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 CBSP35520 551 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 GABRA4P48169 554 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 PLEKHN1Q494U1 663 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 NKAIN1Q4KMZ8 207 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 MRPL14Q6P1L8 145 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 NLRP9Q7RTR0 991 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 PIANPQ8IYJ0 282 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 SYCE1Q8N0S2 351 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 DNAJC22Q8N4W6 341 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 OR5AR1Q8NGP9 310 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 PEX13Q92968 403 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 FAM60AQ9NP50 221 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 INTS7Q9NVH2 962 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 P4HTMQ9NXG6 502 aa17.18■□□□□ 0.34
SHKBP1-227ENST00000602011 CCDC78A2IDD5 438 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 CBX6O95503 412 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 TPH1P17752 444 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 AIMP2Q13155 320 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 ELOAQ14241 798 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 POU6F1Q14863 301 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 CYP2A13Q16696 494 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 KYNUQ16719 465 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 SYTL3Q4VX76 610 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 ZC3H12BQ5HYM0 836 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 FAM71DQ8N9W8 422 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 RNF214Q8ND24 703 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 PRR7Q8TB68 274 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 ASZ1Q8WWH4 475 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 FKBP10Q96AY3 582 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 SNRNP40Q96DI7 357 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 SPRTNQ9H040 489 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 KLHL25Q9H0H3 589 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 ZNF552Q9H707 407 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 ENAMQ9NRM1 1142 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 AGPAT4Q9NRZ5 378 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 AMFRQ9UKV5 643 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 TDRKHQ9Y2W6 561 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 MRFAP1Q9Y605 127 aa17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 COPG1Q9Y678 874 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-227ENST00000602011 DOPEY1Q5JWR5 2465 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 HEATR9A2RTY3 570 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 ISM1B1AKI9 464 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 AGPSO00116 658 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 CCL22O00626 93 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 KRT86O43790 486 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 CLDN1O95832 211 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 RAB28P51157 221 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 CDH17Q12864 832 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 TCTE1Q5JU00 501 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 FLVCR1-AS1Q8TAF5 88 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 C19orf60Q96EN9 201 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 BARD1Q99728 777 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 CARD6Q9BX69 1037 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 FRMD8P1Q9BZ68 369 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 ILKAPQ9H0C8 392 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 WDR54Q9H977 334 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 IRAK4Q9NWZ3 460 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 NXT1Q9UKK6 140 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 SLC5A6Q9Y289 635 aa17.16■□□□□ 0.34
SHKBP1-227ENST00000602011 CRYBG3Q68DQ2 2970 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 BHMG1C9JSJ3 638 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 METTL18O95568 372 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 S1PR4O95977 384 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 ITGAXP20702 1163 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 MMP11P24347 488 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 RAPSNQ13702 412 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 ZIC1Q15915 447 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 FAM214AQ32MH5 1076 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 IRAK1BP1Q5VVH5 260 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 TTC23LQ6PF05 361 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 AFTPHQ6ULP2 937 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 Q6ZS92 163 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 OVCH1Q7RTY7 1134 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 MAMDC2Q7Z304 686 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 PEX26Q7Z412 305 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 ZNF655Q8N720 491 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 LRRC57Q8N9N7 239 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 DNAAF3Q8N9W5 541 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 ALG3Q92685 438 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 ZUFSPQ96AP4 578 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 RANBP9Q96S59 729 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 SLC26A1Q9H2B4 701 aa17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 MRM3Q9HC36 420 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-227ENST00000602011 SPHK1Q9NYA1 384 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms