RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 KRT87PA6NCN2 255 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 SCAMP1O15126 338 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 SKAP2O75563 359 aaPredicted RBP17.5■□□□□ 0.39
VRK3-225ENST00000601912 PRDX3P30048 256 aaKnown RBP17.5■□□□□ 0.39
VRK3-225ENST00000601912 HALP42357 657 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 CTBSQ01459 385 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 BTKQ06187 659 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 NAE1Q13564 534 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 UAP1L1Q3KQV9 507 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 SYTL1Q8IYJ3 562 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 SLC22A18ASQ8N1D0 253 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 CHCHD4Q8N4Q1 142 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 FITM2Q8N6M3 262 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 MFSD2AQ8NA29 543 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 PHC3Q8NDX5 983 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 OR5AR1Q8NGP9 310 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 PYCR2Q96C36 320 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 MED8Q96G25 268 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 PPP1R36Q96LQ0 422 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 NTMT1Q9BV86 223 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 GPR27Q9NS67 375 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 LNPEPQ9UIQ6 1025 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 SLC22A14Q9Y267 594 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 WDR37Q9Y2I8 494 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 DNAJC15Q9Y5T4 150 aa17.5■□□□□ 0.39
VRK3-225ENST00000601912 OR4F21O95013 312 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 ENO1P06733 434 aaKnown RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 EBLN1P0CF75 366 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 IMPA1P29218 277 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 FOXA1P55317 472 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 ERVPABLB-1P60509 514 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 RACK1P63244 317 aaKnown RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 CDC16Q13042 620 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 KRT33BQ14525 404 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 ZXDCQ2QGD7 858 aaPredicted RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 UGT3A2Q3SY77 523 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 TJAP1Q5JTD0 557 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 METTL21CQ5VZV1 264 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 ALYREFQ86V81 257 aaKnown RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 OR4F6Q8NGB9 312 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 OR56A3Q8NH54 315 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 ZNF480Q8WV37 535 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 TWIST2Q8WVJ9 160 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 CCT6BQ92526 530 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 ERP27Q96DN0 273 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 HSPA12BQ96MM6 686 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 CDK15Q96Q40 435 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 FERD3LQ96RJ6 166 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 INSM2Q96T92 566 aaPredicted RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 CCDC28BQ9BUN5 200 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 TMEM168Q9H0V1 697 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 WDR55Q9H6Y2 383 aaPredicted RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 MEAF6Q9HAF1 191 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 CIDEBQ9UHD4 219 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 ZNF225Q9UK10 706 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 TRIM33Q9UPN9 1127 aa17.49■□□□□ 0.39
VRK3-225ENST00000601912 TDRKHQ9Y2W6 561 aaKnown RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 CFAP20Q9Y6A4 193 aaKnown RBP17.49■□□□□ 0.39
VRK3-225ENST00000601912 A0A1B0GTL3 188 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 SERPINA6P08185 405 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 HGFP14210 728 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 ITPKAP23677 461 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 CD38P28907 300 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 EPHA3P29320 983 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 HSD17B2P37059 387 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 BLKP51451 505 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 INHBCP55103 352 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 ILF3Q12906 894 aaKnown RBP eCLIP17.48■□□□□ 0.39
VRK3-225ENST00000601912 TRAF3Q13114 568 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 NXNQ6DKJ4 435 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 CAPN13Q6MZZ7 669 aaPredicted RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 LETMD1Q6P1Q0 360 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 WASH2PQ6VEQ5 465 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 YTHDF3Q7Z739 585 aaKnown RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 IQCHQ86VS3 1027 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 THOC6Q86W42 341 aaKnown RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 KLHDC8AQ8IYD2 350 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 RAB42Q8N4Z0 105 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 CDYL2Q8N8U2 506 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 METTL6Q8TCB7 284 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 C19orf60Q96EN9 201 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 MAGEB10Q96LZ2 347 aaPredicted RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 KCNA7Q96RP8 456 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 CCT7Q99832 543 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 MIR1-1HGQ9H1L0 117 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 ACTR8Q9H981 624 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 WASH6PQ9NQA3 447 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 PRDM8Q9NQV8 689 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 IMP3Q9NV31 184 aaKnown RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 POLG2Q9UHN1 485 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 HEBP2Q9Y5Z4 205 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 GOLGA8QA0A0J9YX86 632 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 GOLGA8OA6NCC3 632 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 ZNF839A8K0R7 811 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 GOLGA8NF8WBI6 632 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 FCHO1O14526 889 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 LAMTOR5O43504 91 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 CLDN9O95484 217 aa17.48■□□□□ 0.39
VRK3-225ENST00000601912 JUNP05412 331 aaKnown RBP17.48■□□□□ 0.39
VRK3-225ENST00000601912 HMOX2P30519 316 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms