RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MVB12BQ9H7P6 319 aa21.96■■□□□ 1.11
IRF3-228ENST00000601291 MID1IP1Q9NPA3 183 aa21.96■■□□□ 1.11
IRF3-228ENST00000601291 PNPOQ9NVS9 261 aa21.96■■□□□ 1.11
IRF3-228ENST00000601291 POLG2Q9UHN1 485 aa21.96■■□□□ 1.11
IRF3-228ENST00000601291 KLF15Q9UIH9 416 aa21.96■■□□□ 1.11
IRF3-228ENST00000601291 TDRKHQ9Y2W6 561 aaKnown RBP21.96■■□□□ 1.11
IRF3-228ENST00000601291 CEP192Q8TEP8 1941 aa21.96■■□□□ 1.11
IRF3-228ENST00000601291 KRT87PA6NCN2 255 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 SLCO1B7G3V0H7 640 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 KATNA1O75449 491 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 WDR47O94967 919 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 CSF2P04141 144 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 NME1P15531 152 aaKnown RBP21.95■■□□□ 1.11
IRF3-228ENST00000601291 EPB42P16452 691 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 IMPA1P29218 277 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 GDF5P43026 501 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 SF3A3Q12874 501 aaKnown RBP eCLIP21.95■■□□□ 1.111e-6■■■■□ 19.4
IRF3-228ENST00000601291 PLK5Q496M5 336 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 CEP68Q76N32 757 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 SPATS2Q86XZ4 545 aaKnown RBP21.95■■□□□ 1.11
IRF3-228ENST00000601291 NRROSQ86YC3 692 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 ATG10Q9H0Y0 220 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 ZBTB26Q9HCK0 441 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 SUSD2Q9UGT4 822 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 CIDEBQ9UHD4 219 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 ZDHHC2Q9UIJ5 367 aa21.95■■□□□ 1.11
IRF3-228ENST00000601291 A0A1B0GTW7 788 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 UBFD1O14562 309 aaKnown RBP21.95■■□□□ 1.1
IRF3-228ENST00000601291 KDM1AO60341 852 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 MTHFD1P11586 935 aaKnown RBP21.95■■□□□ 1.1
IRF3-228ENST00000601291 F3P13726 295 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 HSD17B2P37059 387 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 CSNK1EP49674 416 aaKnown RBP21.95■■□□□ 1.1
IRF3-228ENST00000601291 RPE65Q16518 533 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 DUS1LQ6P1R4 473 aaKnown RBP21.95■■□□□ 1.1
IRF3-228ENST00000601291 TAF8Q7Z7C8 310 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 SYTL1Q8IYJ3 562 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 CACNA2D3Q8IZS8 1091 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 ANKS4BQ8N8V4 417 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 CCDC197Q8NCU1 140 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 AGAP11Q8TF27 550 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 NELL1Q92832 810 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 ATP6V1E2Q96A05 226 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 FAR2Q96K12 515 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 ZNF382Q96SR6 550 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 NOL11Q9H8H0 719 aaKnown RBP21.95■■□□□ 1.1
IRF3-228ENST00000601291 ZSCAN32Q9NX65 697 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 SPATA7Q9P0W8 599 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 LNPEPQ9UIQ6 1025 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 DCTN4Q9UJW0 460 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 USH1CQ9Y6N9 552 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 COLEC10Q9Y6Z7 277 aa21.95■■□□□ 1.1
IRF3-228ENST00000601291 ATXN2Q99700 1313 aaKnown RBP21.94■■□□□ 1.1
IRF3-228ENST00000601291 CACNA1IQ9P0X4 2223 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 VCANP13611 3396 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 ZFC3H1O60293 1989 aaKnown RBP21.94■■□□□ 1.1
IRF3-228ENST00000601291 OR52A4PA6NMU1 304 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 ZNF839A8K0R7 811 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 HRO43593 1189 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 OTCP00480 354 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 NDUFS1P28331 727 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 ARL1P40616 181 aaPredicted RBP21.94■■□□□ 1.1
IRF3-228ENST00000601291 PKNOX1P55347 436 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 PRKG2Q13237 762 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 ELOCQ15369 112 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 PRRT3Q5FWE3 981 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 SNX31Q8N9S9 440 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 RFWD2Q8NHY2 731 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 ZNF480Q8WV37 535 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 MED8Q96G25 268 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 SEC16BQ96JE7 1060 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 LRRC61Q9BV99 259 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 IPPKQ9H8X2 491 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 DNAJC11Q9NVH1 559 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 TAAR2Q9P1P5 351 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 VTI1BQ9UEU0 232 aa21.94■■□□□ 1.1
IRF3-228ENST00000601291 A0A0G2JND7 137 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 GPR37L1O60883 481 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 CRCPO75575 148 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 ESRRBO95718 433 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 SLC2A4P14672 509 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 CCNG1P51959 295 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 PNLIPRP1P54315 467 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 SH3BP2P78314 561 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 NAE1Q13564 534 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 ARHGAP19Q14CB8 494 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 GPRIN3Q6ZVF9 776 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 KLHDC8AQ8IYD2 350 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 OR56A3Q8NH54 315 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 PYCR2Q96C36 320 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 RAB11FIP5Q9BXF6 653 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 KCNK4Q9NYG8 393 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 SCHIP1Q9P0W5 487 aaPredicted RBP21.93■■□□□ 1.1
IRF3-228ENST00000601291 ARL2BPQ9Y2Y0 163 aa21.93■■□□□ 1.1
IRF3-228ENST00000601291 A6NCN8 305 aa21.92■■□□□ 1.1
IRF3-228ENST00000601291 PPP6CO00743 305 aa21.92■■□□□ 1.1
IRF3-228ENST00000601291 ARFIP2P53365 341 aa21.92■■□□□ 1.1
IRF3-228ENST00000601291 AQP5P55064 265 aa21.92■■□□□ 1.1
IRF3-228ENST00000601291 HNRNPKP61978 463 aaKnown RBP eCLIP21.92■■□□□ 1.1
IRF3-228ENST00000601291 GRB7Q14451 532 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms