RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PLA2G16P53816 162 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 CD47Q08722 323 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 SKIV2LQ15477 1246 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF829Q3KNS6 432 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 LAIR2Q6ISS4 152 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 Q6ZNX1 250 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 GPR149Q86SP6 731 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 NXPE1Q8N323 547 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 SVOPLQ8N434 492 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 SERHLQ9NQF3 203 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 PDE10AQ9Y233 779 aa19.76■□□□□ 0.75
SHKBP1-225ENST00000600733 NUP214P35658 2090 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 E2F6O75461 281 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 MYCLP1P12525 358 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 DCTP40126 519 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 NEK2P51955 445 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 BFSP2Q13515 415 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 GTF2IRD2BQ6EKJ0 949 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 DET1Q7L5Y6 550 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 GTF2IRD2Q86UP8 949 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 SLC22A15Q8IZD6 547 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 ARL14EPQ8N8R7 260 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 SMYD1Q8NB12 490 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 BORCS5Q969J3 196 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 HTATIP2Q9BUP3 242 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 PARVBQ9HBI1 364 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 ASIC5Q9NY37 505 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 USE1Q9NZ43 259 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 BACE2Q9Y5Z0 518 aa19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 ZNF106Q9H2Y7 1883 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-225ENST00000600733 GREM1O60565 184 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 CLDN9O95484 217 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 RETP07949 1114 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 TACR1P25103 407 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 GSTM2P28161 218 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 RPS14P62263 151 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 VAC14Q08AM6 782 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 ZXDCQ2QGD7 858 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 RNF165Q6ZSG1 346 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 GPR26Q8NDV2 337 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 GIPC3Q8TF64 312 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 FAM120BQ96EK7 910 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 NRBF2Q96F24 287 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 TSSK3Q96PN8 268 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 CPPED1Q9BRF8 314 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 TBC1D23Q9NUY8 699 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 ARL15Q9NXU5 204 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 CLEC4EQ9ULY5 219 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 SCN5AQ14524 2016 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 NPIPB15A6NHN6 443 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 PFKLP17858 780 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 SPAM1P38567 509 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 CDKN2CP42773 168 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 RPIAP49247 311 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 BMXP51813 675 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 TPGS1Q6ZTW0 290 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 GALNT13Q8IUC8 556 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 ADHFE1Q8IWW8 467 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 PLPP6Q8IY26 295 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 EID3Q8N140 333 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 OR52E4Q8NGH9 312 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 C2orf49Q9BVC5 232 aaPredicted RBP19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 DGCR6LQ9BY27 220 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 RDH14Q9HBH5 336 aa19.74■□□□□ 0.75
SHKBP1-225ENST00000600733 LOC100130705A0A1B0GUX0 176 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 HOXA2O43364 376 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 ABLIM3O94929 683 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 EFEMP2O95967 443 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 NR4A1P22736 598 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 GZMMP51124 257 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 C21orf59P57076 290 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 EPS8Q12929 822 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 TUBA3CQ13748 450 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 DPY19L1Q2PZI1 675 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 ATG9BQ674R7 924 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 LHX8Q68G74 356 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 TXNDC8Q6A555 127 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 RETSATQ6NUM9 610 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 DNAJB7Q7Z6W7 309 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 CALHM3Q86XJ0 350 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 ZCCHC7Q8N3Z6 543 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 RAB2BQ8WUD1 216 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 PLEKHA8Q96JA3 519 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 FAIMQ9NVQ4 179 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 KRT87PA6NCN2 255 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 C16orf96A6NNT2 1141 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 FAM220BPB1ANY3 271 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 LRATO95237 230 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 BCL10O95999 233 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 KRT6AP02538 564 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 C1QCP02747 245 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 KRT6BP04259 564 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 HNRNPCP07910 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 ANXA5P08758 320 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 S100A3P33764 101 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 KRT6CP48668 564 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 SPIDRQ14159 915 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 TTLL9Q3SXZ7 439 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 CES5AQ6NT32 575 aa19.73■□□□□ 0.75
SHKBP1-225ENST00000600733 OR5K1Q8NHB7 308 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms