RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ASB11Q8WXH4 323 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 OR2A14Q96R47 310 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 CD180Q99467 661 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 SPRY4Q9C004 299 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 B3GNT4Q9C0J1 378 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 APMAPQ9HDC9 416 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 NINJ2Q9NZG7 142 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 TSR3Q9UJK0 312 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 SSUH2Q9Y2M2 353 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 TDRKHQ9Y2W6 561 aaKnown RBP18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 SPTBP11277 2137 aa18.89■□□□□ 0.61
SHKBP1-221ENST00000599833 ANKRD12Q6UB98 2062 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 EIF3FO00303 357 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 RASGRF2O14827 1237 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 NVLO15381 856 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 VPS26AO75436 327 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 CHRM5P08912 532 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 CBSLP0DN79 551 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 MCM3P25205 808 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 PRDX3P30048 256 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 SLC5A2P31639 672 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 CSTF2P33240 577 aaKnown RBP eCLIP18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 CBSP35520 551 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 RAB28P51157 221 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 DNTTIP2Q5QJE6 756 aaKnown RBP18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 CARFQ8N187 725 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 FBF1Q8TES7 1133 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 FGF11Q92914 225 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 USP7Q93009 1102 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 FUT8Q9BYC5 575 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 CCDC68Q9H2F9 335 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 RHOJQ9H4E5 214 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 ACTR10Q9NZ32 417 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 OR6C2Q9NZP2 312 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 ATMQ13315 3056 aa18.88■□□□□ 0.61
SHKBP1-221ENST00000599833 SRRM3A6NNA2 597 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 MYO1CO00159 1063 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 MATN2O00339 956 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 JMJD7P0C870 316 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 ENO3P13929 434 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 EIF2S3P41091 472 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 SEPHS1P49903 392 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 EFTUD2Q15029 972 aaKnown RBP eCLIP18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 ST3GAL2Q16842 350 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 KBTBD12Q3ZCT8 623 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 FAM45BPQ6NSW5 357 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 FBXO15Q8NCQ5 510 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 OR2L8Q8NGY9 312 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 GABPB2Q8TAK5 448 aaPredicted RBP18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 HMGCLL1Q8TB92 370 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 FAM45AQ8TCE6 357 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 EEF1AKMT1Q8WVE0 214 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 UBXN4Q92575 508 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 DDA1Q9BW61 102 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 ZMYND15Q9H091 742 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 FBXO8Q9NRD0 319 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 THSD1Q9NS62 852 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 TAS2R13Q9NYV9 303 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 IKZF3Q9UKT9 509 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 PTPRQQ9UMZ3 2332 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 BSNQ9UPA5 3926 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 BTRCQ9Y297 605 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 VWA7Q9Y334 891 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 B3GALT1Q9Y5Z6 326 aa18.87■□□□□ 0.61
SHKBP1-221ENST00000599833 PCM1Q15154 2024 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 A0A087WV48 116 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 A0A1W2PPV9 198 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 RPN2P04844 631 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 FOLR1P15328 257 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 ST6GAL1P15907 406 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 UGT2B7P16662 529 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 RBMS1P29558 406 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 PPM1FP49593 454 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 MAPK10P53779 464 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 TAS2R39P59534 338 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 KCNAB1Q14722 419 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 ZIC1Q15915 447 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 CYP2A13Q16696 494 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 TTLL9Q3SXZ7 439 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 ANKS6Q68DC2 871 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 SPESP1Q6UW49 350 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 CEP97Q8IW35 865 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 D2HGDHQ8N465 521 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 GPATCH11Q8N954 259 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 IFT81Q8WYA0 676 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 RAD51AP1Q96B01 352 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 VPS39Q96JC1 886 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 TRAPPC9Q96Q05 1148 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 TAAR9Q96RI9 348 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 FMO2Q99518 471 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 CDC42EP4Q9H3Q1 356 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 C1GALT1Q9NS00 363 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 TRMT6Q9UJA5 497 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 ADAMTS6Q9UKP5 1117 aa18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 MTO1Q9Y2Z2 717 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-221ENST00000599833 FAM95CA0A1B0GW59 222 aa18.85■□□□□ 0.61
SHKBP1-221ENST00000599833 PIPSLA2A3N6 862 aa18.85■□□□□ 0.61
SHKBP1-221ENST00000599833 C2orf74A8MZ97 194 aa18.85■□□□□ 0.61
SHKBP1-221ENST00000599833 ESPNB1AK53 854 aa18.85■□□□□ 0.61
SHKBP1-221ENST00000599833 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms