RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 EFTUD2Q15029 972 aaKnown RBP eCLIP19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 GRTP1Q5TC63 336 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 PRSS42Q7Z5A4 293 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 FAM129CQ86XR2 697 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 ADGRF3Q8IZF5 1079 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 MYO1HQ8N1T3 1032 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 MDM1Q8TC05 714 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 EEF1AKMT1Q8WVE0 214 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 LINGO1Q96FE5 620 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 CYTH2Q99418 400 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 MAP3K3Q99759 626 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 RAB11FIP5Q9BXF6 653 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 OR6C2Q9NZP2 312 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 POMT2Q9UKY4 750 aa19.06■□□□□ 0.64
SHKBP1-214ENST00000597396 PKD1L2Q7Z442 2459 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 PIPSLA2A3N6 862 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 EFCAB7A8K855 629 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 ARHGEF33A8MVX0 844 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 CHRM5P08912 532 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 TPBGLP0DKB5 382 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 ITIH1P19827 911 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 CDH3P22223 829 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 MAP4P27816 1152 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 KPNA2P52292 529 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 PGGT1BP53609 377 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 TAS2R39P59534 338 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 IL2P60568 153 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 TUBB4BP68371 445 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 CCSMST1Q4G0I0 132 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 GSPT2Q8IYD1 628 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 UBXN4Q92575 508 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 MRRFQ96E11 262 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 TSPAN17Q96FV3 270 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 IL17FQ96PD4 163 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 MCMBPQ9BTE3 642 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 ZNF768Q9H5H4 540 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 ACTR10Q9NZ32 417 aa19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 MTO1Q9Y2Z2 717 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-214ENST00000597396 ISM1B1AKI9 464 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 RASGRF2O14827 1237 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 ZBTB14O43829 449 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 MLLT3P42568 568 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 ARL4DP49703 201 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 POU4F1Q01851 419 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 GRB7Q14451 532 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 USP10Q14694 798 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 UAP1Q16222 522 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 UBAP2Q5T6F2 1119 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 CYHR1Q6ZMK1 362 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 UBE2R2Q712K3 238 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 OR9A1PQ8NGU1 263 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 OR2L8Q8NGY9 312 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 ASB11Q8WXH4 323 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 PRR11Q96HE9 360 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 GPR22Q99680 433 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 ACSS3Q9H6R3 686 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 SYTL2Q9HCH5 934 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 OCIAD1Q9NX40 245 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 SPATA7Q9P0W8 599 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 LNPEPQ9UIQ6 1025 aa19.04■□□□□ 0.64
SHKBP1-214ENST00000597396 IGHV5-51A0A0C4DH38 117 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 KRT87PA6NCN2 255 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 FAM155BO75949 473 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 DXOO77932 396 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 SYF2O95926 243 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 C8GP07360 202 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 ITGA2BP08514 1039 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 FAM153BP0C7A2 387 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 CCL4P13236 92 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 CYP2A7P20853 494 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 PRDX3P30048 256 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 ETV5P41161 510 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 ZNF460Q14592 562 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 FAM153CQ494X1 144 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 IGF2-ASQ6U949 168 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 TAX1BP1Q86VP1 789 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 PROSER1Q86XN7 944 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 C2orf73Q8N5S3 287 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 EIF1ADQ8N9N8 165 aaKnown RBP19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 SLC46A1Q96NT5 459 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 MENTQ9BUN1 341 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 C1GALT1Q9NS00 363 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 THSD1Q9NS62 852 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 SPHK1Q9NYA1 384 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 DKK4Q9UBT3 224 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 ZFYVE26Q68DK2 2539 aa19.03■□□□□ 0.64
SHKBP1-214ENST00000597396 A0A087WUV0 522 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 PABPN1LA6NDY0 278 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 GFYI3L273 518 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 TAF4O00268 1085 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 ZZEF1O43149 2961 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 FGF3P11487 239 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 UGT2B7P16662 529 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 ZNF37AP17032 561 aaPredicted RBP19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 TNFRSF8P28908 595 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 PMS2P54278 862 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 SP140Q13342 867 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 KIR2DS3Q14952 304 aa19.02■□□□□ 0.64
SHKBP1-214ENST00000597396 TMEM164Q5U3C3 297 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms