RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TXNDC16Q9P2K2 825 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 EPHA6Q9UF33 1036 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 MED16Q9Y2X0 877 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 PSAT1Q9Y617 370 aa10.75□□□□□ -0.69
LIG1-211ENST00000596457 FAM95CA0A1B0GW59 222 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 SLC9B1P1A6NJY1 282 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 C2orf74A8MZ97 194 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 ITGA2BP08514 1039 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 CHRM5P08912 532 aaPredicted RBP10.74□□□□□ -0.69
LIG1-211ENST00000596457 PRDX3P30048 256 aaKnown RBP10.74□□□□□ -0.69
LIG1-211ENST00000596457 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
LIG1-211ENST00000596457 SH3BP2P78314 561 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 FRG1Q14331 258 aaKnown RBP10.74□□□□□ -0.69
LIG1-211ENST00000596457 KCNAB1Q14722 419 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 KYNUQ16719 465 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 TEX35Q5T0J7 233 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 TMEM164Q5U3C3 297 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 ANKS6Q68DC2 871 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 FAM45BPQ6NSW5 357 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 PAQR3Q6TCH7 311 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 IGF2-ASQ6U949 168 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 TRIM73Q86UV7 250 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 SLC26A11Q86WA9 606 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 ZFAND4Q86XD8 727 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 RAB42Q8N4Z0 105 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 PPM1NQ8N819 430 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 SNIP1Q8TAD8 396 aaKnown RBP10.74□□□□□ -0.69
LIG1-211ENST00000596457 FAM45AQ8TCE6 357 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 CD200R1Q8TD46 325 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 MAGEC3Q8TD91 643 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 FBF1Q8TES7 1133 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 EEF1AKMT1Q8WVE0 214 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 SEC14L1Q92503 715 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 PMEPA1Q969W9 287 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 RAD51AP1Q96B01 352 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 OR6C1Q96RD1 312 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 RAB33BQ9H082 229 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 ZNF768Q9H5H4 540 aaKnown RBP10.74□□□□□ -0.69
LIG1-211ENST00000596457 LRRC4CQ9HCJ2 640 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 APMAPQ9HDC9 416 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 NSMCE4AQ9NXX6 385 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 SPHK1Q9NYA1 384 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 FOXJ2Q9P0K8 574 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 VWA7Q9Y334 891 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 ACACAQ13085 2346 aa10.74□□□□□ -0.69
LIG1-211ENST00000596457 TCRBV9S1A1TA0A576 114 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 TLCD2A6NGC4 264 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 CDRT15L2A8MXV6 281 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 C9orf172C9J069 976 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 RASGRF2O14827 1237 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 MATN4O95460 622 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 CATP04040 527 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 GSTA2P09210 222 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 ANKRD34CP0C6C1 535 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 EBLN1P0CF75 366 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 MPC1LP0DKB6 136 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 PVRP15151 417 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 UGT2B7P16662 529 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 MAP4P27816 1152 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 ATP5DP30049 168 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 PKLRP30613 574 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 CCNFP41002 786 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 EIF2S3P41091 472 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 SKIV2L2P42285 1042 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 RGS4P49798 205 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 SLC12A2P55011 1212 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 PCBP4P57723 403 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 ERVPABLB-1P60509 514 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 TIAL1Q01085 375 aaKnown RBP eCLIP10.73□□□□□ -0.69
LIG1-211ENST00000596457 MC2RQ01718 297 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 CBLBQ13191 982 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 GRB7Q14451 532 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 GBX1Q14549 363 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 EFTUD2Q15029 972 aaKnown RBP eCLIP10.73□□□□□ -0.69
LIG1-211ENST00000596457 UAP1Q16222 522 aaPredicted RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 KBTBD12Q3ZCT8 623 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 TMTC4Q5T4D3 741 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 DCAF12Q5T6F0 453 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 C19orf48Q6RUI8 117 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 UBE2R2Q712K3 238 aaPredicted RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 PIWIL4Q7Z3Z4 852 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 PRSS42Q7Z5A4 293 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 GALNT7Q86SF2 657 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 ZC3HC1Q86WB0 502 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 RASGRP3Q8IV61 690 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 FAM20CQ8IXL6 584 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 IFT20Q8IY31 132 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 MYO1HQ8N1T3 1032 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 UHMK1Q8TAS1 419 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 HNRNPLLQ8WVV9 542 aaKnown RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 KLHL6Q8WZ60 621 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 UBXN4Q92575 508 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 LINGO1Q96FE5 620 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 FMO2Q99518 471 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 OLFM1Q99784 485 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.73□□□□□ -0.69
LIG1-211ENST00000596457 LNPEPQ9UIQ6 1025 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 POMT2Q9UKY4 750 aa10.73□□□□□ -0.69
LIG1-211ENST00000596457 NFU1Q9UMS0 254 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms