RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 C18orf21Q32NC0 220 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 KDM4DQ6B0I6 523 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 TUBA3EQ6PEY2 450 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CHST9Q7L1S5 443 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 SNX20Q7Z614 316 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 BTLAQ7Z6A9 289 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 B3GNT8Q7Z7M8 397 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ZDHHC21Q8IVQ6 265 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CADM3Q8N126 398 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ZNF513Q8N8E2 541 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 CNIH3Q8TBE1 160 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 NETO1Q8TDF5 533 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ASPSCR1Q9BZE9 553 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 TNKS2Q9H2K2 1166 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 RDH14Q9HBH5 336 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 TMEM165Q9HC07 324 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 SARS2Q9NP81 518 aaKnown RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 IL17CQ9P0M4 197 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 SCHIP1Q9P0W5 487 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 ANKMY1Q9P2S6 941 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 DNMT3BQ9UBC3 853 aaKnown RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 OPTCQ9UBM4 332 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ANGPTL3Q9Y5C1 460 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 NPIPB8E9PQR5 432 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 MANBAO00462 879 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ACPPP15309 386 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 PRKACGP22612 351 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 NR4A1P22736 598 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 DGKAP23743 735 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 PRPH2P23942 346 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 SLC6A4P31645 630 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 UGT2B10P36537 528 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 THPOP40225 353 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 HSPA7P48741 367 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 NKX3-2P78367 333 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 PLIN5Q00G26 463 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 IFITM3Q01628 133 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CLCA4Q14CN2 919 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CCDC92Q53HC0 331 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 CDKL4Q5MAI5 379 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 NCEH1Q6PIU2 408 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 GLB1LQ6UWU2 654 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 GCNT7Q6ZNI0 430 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 TAS2R42Q7RTR8 314 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 NUDT8Q8WV74 236 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 GLMNQ92990 594 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 HBEGFQ99075 208 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 TBCDQ9BTW9 1192 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 SPON2Q9BUD6 331 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 BTBD2Q9BX70 525 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 SP140LQ9H930 580 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ZNF408Q9H9D4 720 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CPNE5Q9HCH3 593 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ELOVL2Q9NXB9 296 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 KIAA1522Q9P206 1035 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 ZNF490Q9ULM2 529 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 PKP3Q9Y446 797 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 PCDHB14Q9Y5E9 798 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ACTL7AQ9Y615 435 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ZFP37Q9Y6Q3 630 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 A3GALT2U3KPV4 340 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 TTC34A8MYJ7 566 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 E9PQ18 207 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 CA12O43570 354 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 RGS10O43665 173 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 XPNPEP2O43895 674 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 KDM1AO60341 852 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 TLR5O60602 858 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 DPM1O60762 260 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 SEC22BO75396 215 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 EOMESO95936 686 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 FTH1P02794 183 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 RHOCP08134 193 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 EFNA1P20827 205 aaPredicted RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 FPR1P21462 350 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 DNAJA1P31689 397 aaKnown RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 HOXD12P35452 270 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 SLC11A2P49281 568 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 CLK3P49761 638 aaKnown RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 PPP5CP53041 499 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 RPS14P62263 151 aaKnown RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 SMARCB1Q12824 385 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 GNASQ5JWF2 1037 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 PERM1Q5SV97 790 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 PTRHD1Q6GMV3 140 aaKnown RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 OR2T5Q6IEZ7 315 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 CES5AQ6NT32 575 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 SUSD1Q6UWL2 747 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 SERPINA11Q86U17 422 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 TSPYL5Q86VY4 417 aaPredicted RBP12.94□□□□□ -0.34
VRK3-209ENST00000594948 CYP4Z1Q86W10 505 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 RGL4Q8IZJ4 473 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 ABI1Q8IZP0 508 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 CFAP52Q8N1V2 620 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 EFHBQ8N7U6 833 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 KIAA1958Q8N8K9 716 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 OR2T29Q8NH02 315 aa12.94□□□□□ -0.34
VRK3-209ENST00000594948 NDNFQ8TB73 568 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms