RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 UNC5BQ8IZJ1 945 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 C19orf47Q8N9M1 422 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 SKA2Q8WVK7 121 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 N4BP2L2Q92802 583 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 EXTL1Q92935 676 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 BIRC8Q96P09 236 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 FAM167BQ9BTA0 163 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 TWSG1Q9GZX9 223 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 DDX47Q9H0S4 455 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 CCDC68Q9H2F9 335 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 INTS7Q9NVH2 962 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 COMMD10Q9Y6G5 202 aa17.16■□□□□ 0.34
SHKBP1-204ENST00000594862 USP27XA6NNY8 438 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 E5RI56 91 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 DNALI1O14645 258 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 TIAF1O95411 115 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 TTC4O95801 387 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 S1PR4O95977 384 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 PKMP14618 531 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 PGAM1P18669 254 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 CYP2A7P20853 494 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 FMO4P31512 558 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 PAFAH1B1P43034 410 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 CCR10P46092 362 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 DNASE1L3Q13609 305 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 LONRF1Q17RB8 773 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 CTSL3PQ5NE16 218 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 VRK3Q8IV63 474 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 GPR135Q8IZ08 494 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 OR2A14Q96R47 310 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 DPH2Q9BQC3 489 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 KLHL42Q9P2K6 505 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 TUBD1Q9UJT1 453 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 SLC39A10Q9ULF5 831 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 COL6A6A6NMZ7 2263 aa17.15■□□□□ 0.34
SHKBP1-204ENST00000594862 ISM1B1AKI9 464 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 TMEM150CB9EJG8 249 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 RASGRF2O14827 1237 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 CHRM3P20309 590 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 CD9P21926 228 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 ITGA1P56199 1179 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 RPS15P62841 145 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 CYP4F2P78329 520 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 ABRQ12979 859 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 LY6DQ14210 128 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 NAA25Q14CX7 972 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 LINC00303Q3SY05 128 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 FBXO38Q6PIJ6 1188 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 CENPUQ71F23 418 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 ZNF843Q8N446 348 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 ZBTB2Q8N680 514 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 OR2L8Q8NGY9 312 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 CFAP61Q8NHU2 1237 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 PPM1MQ96MI6 270 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 SLC7A5P2Q9GIP4 190 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 FAM114A2Q9NRY5 505 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 C20orf96Q9NUD7 363 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 IL17BQ9UHF5 180 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 AP1M2Q9Y6Q5 423 aa17.14■□□□□ 0.33
SHKBP1-204ENST00000594862 ZCWPW2A0A1B0GU75 182 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 GOLGA8KD6RF30 607 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 E7EQ34 232 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 GOLGA8TH3BQL2 631 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 TERTO14746 1132 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 NTRK1P04629 796 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 TPBGLP0DKB5 382 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 DR1Q01658 176 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 GBX1Q14549 363 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 MORF4L2Q15014 288 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 IZUMO3Q5VZ72 239 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 NEK10Q6ZWH5 1172 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 HMGCLL1Q8TB92 370 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 CT55Q8WUE5 264 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 KCNJ9Q92806 393 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 CLIP3Q96DZ5 547 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 CAPZA3Q96KX2 299 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 SIGLEC10Q96LC7 697 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 C17orf62Q9BQA9 187 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 ACTR5Q9H9F9 607 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 SPATA7Q9P0W8 599 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 CRYL1Q9Y2S2 319 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 FAM169AQ9Y6X4 670 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 TENM4Q6N022 2769 aa17.13■□□□□ 0.33
SHKBP1-204ENST00000594862 NKX2-8O15522 239 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 KATNA1O75449 491 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 CREG1O75629 220 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 C1orf105O95561 183 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 PRKAR1AP10644 381 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 PVRP15151 417 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 ZNF517Q6ZMY9 492 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 CDHR3Q6ZTQ4 885 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 CREG2Q8IUH2 290 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 PDIK1LQ8N165 341 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 OR1L3Q8NH93 324 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 FLVCR1-AS1Q8TAF5 88 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 DENND1AQ8TEH3 1009 aa17.12■□□□□ 0.33
SHKBP1-204ENST00000594862 APOBEC4Q8WW27 367 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms