RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 SLC7A5P2Q9GIP4 190 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 STARD5Q9NSY2 213 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 SPHK1Q9NYA1 384 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 MRFAP1Q9Y605 127 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 ISM1B1AKI9 464 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 E7EQ34 232 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 CREG1O75629 220 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 RECKO95980 971 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 CD9P21926 228 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 PKLRP30613 574 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 ITGA1P56199 1179 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 GPS2Q13227 327 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 KCNAB2Q13303 367 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 THOC5Q13769 683 aaKnown RBP14.75□□□□□ -0.05
TRIM28-203ENST00000593582 SLC5A12Q1EHB4 618 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 CTSL3PQ5NE16 218 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 PLEKHS1Q5SXH7 462 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 ATP1A1-AS1Q5TC04 95 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 FAM199XQ6PEV8 388 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-203ENST00000593582 CILP2Q8IUL8 1156 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 PPIL6Q8IXY8 311 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 GPR135Q8IZ08 494 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 NAT8LQ8N9F0 302 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 SLC38A9Q8NBW4 561 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 SEC14L1Q92503 715 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 SLC22A18Q96BI1 424 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 ZNF669Q96BR6 464 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-203ENST00000593582 CLIP3Q96DZ5 547 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 FOPNLQ96NB1 174 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 LRFN5Q96NI6 719 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 FAM117AQ9C073 453 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 TWSG1Q9GZX9 223 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 SLC25A18Q9H1K4 315 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 ACTL8Q9H568 366 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 ACTR5Q9H9F9 607 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-203ENST00000593582 AKIRIN1Q9H9L7 192 aaPredicted RBP14.75□□□□□ -0.05
TRIM28-203ENST00000593582 INTS10Q9NVR2 710 aaKnown RBP14.75□□□□□ -0.05
TRIM28-203ENST00000593582 TUBD1Q9UJT1 453 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 SLC39A10Q9ULF5 831 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 CRYL1Q9Y2S2 319 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 MAD1L1Q9Y6D9 718 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 ZNF462Q96JM2 2506 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 BAHCC1Q9P281 2608 aa14.75□□□□□ -0.05
TRIM28-203ENST00000593582 GCN1Q92616 2671 aaKnown RBP14.74□□□□□ -0.05
TRIM28-203ENST00000593582 CTAGE9A4FU28 777 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 MEN1O00255 615 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 NIPSNAP2O75323 286 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 PLA2G2AP14555 144 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 CHRM3P20309 590 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 PTPN4P29074 926 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 MAGEA3P43357 314 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 ZNF789Q5FWF6 425 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 PRAMEF17Q5VTA0 474 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 ZNF470Q6ECI4 717 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 ZNF517Q6ZMY9 492 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-203ENST00000593582 TMEM135Q86UB9 458 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 RAB42Q8N4Z0 105 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 FLVCR1-AS1Q8TAF5 88 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 RAD51AP1Q96B01 352 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 TRIM56Q9BRZ2 755 aaKnown RBP14.74□□□□□ -0.05
TRIM28-203ENST00000593582 MENTQ9BUN1 341 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 RAB11FIP5Q9BXF6 653 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 CHRNA10Q9GZZ6 450 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 IL1RAPL1Q9NZN1 696 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 ASIC3Q9UHC3 531 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 CIDEBQ9UHD4 219 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 POLHQ9Y253 713 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 HEMK1Q9Y5R4 338 aaPredicted RBP14.74□□□□□ -0.05
TRIM28-203ENST00000593582 COL6A6A6NMZ7 2263 aa14.74□□□□□ -0.05
TRIM28-203ENST00000593582 CDC14CA4D256 554 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 USP27XA6NNY8 438 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 E5RI56 91 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 RASGRF2O14827 1237 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 ZNF749O43361 778 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 USP1O94782 785 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 C1orf105O95561 183 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 HBQ1P09105 142 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 ATP5DP30049 168 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 PEBP1P30086 187 aaKnown RBP14.73□□□□□ -0.05
TRIM28-203ENST00000593582 RORAP35398 523 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 CCNFP41002 786 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 GNG11P61952 73 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 GRB7Q14451 532 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 ZIC1Q15915 447 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 IZUMO3Q5VZ72 239 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 CNSTQ6PJW8 725 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 CENPUQ71F23 418 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 DSELQ8IZU8 1212 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 LINC01555Q8NAE3 123 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 OR2L8Q8NGY9 312 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 MAGEC3Q8TD91 643 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 FAM136AQ96C01 138 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 PDLIM2Q96JY6 352 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 DDX47Q9H0S4 455 aaKnown RBP14.73□□□□□ -0.05
TRIM28-203ENST00000593582 CHST8Q9H2A9 424 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 FAM60AQ9NP50 221 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 PCYOX1Q9UHG3 505 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 FARSAQ9Y285 508 aaKnown RBP14.73□□□□□ -0.05
TRIM28-203ENST00000593582 AP1M2Q9Y6Q5 423 aa14.73□□□□□ -0.05
TRIM28-203ENST00000593582 ZCWPW2A0A1B0GU75 182 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms