RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RHBDD2Q6NTF9 364 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 AFTPHQ6ULP2 937 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 MRGPREQ86SM8 312 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 ZNF655Q8N720 491 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-207ENST00000593089 RBMXL3Q8N7X1 1067 aaKnown RBP19.74■□□□□ 0.75
TRIM47-207ENST00000593089 Q8NA96 180 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 TTC1Q99614 292 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 C17orf62Q9BQA9 187 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 ETNK1Q9HBU6 452 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 NDOR1Q9UHB4 597 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 CDYLQ9Y232 598 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 ERI2A8K979 691 aaKnown RBP19.73■□□□□ 0.75
TRIM47-207ENST00000593089 E7EVH7 732 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 ZSCAN9O15535 394 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-207ENST00000593089 KDM1AO60341 852 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 IFNB1P01574 187 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 FOLR3P41439 243 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 GRIA1P42261 906 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 DCDP81605 110 aaKnown RBP19.73■□□□□ 0.75
TRIM47-207ENST00000593089 PLOD1Q02809 727 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-207ENST00000593089 SSPNQ14714 243 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 SLC5A12Q1EHB4 618 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 TSTD2Q5T7W7 516 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 HPS6Q86YV9 775 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 TMEM139Q8IV31 216 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 FAM20CQ8IXL6 584 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 PROKR1Q8TCW9 393 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 HES6Q96HZ4 224 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 ZNF778Q96MU6 729 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 GBP5Q96PP8 586 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 SMAD5Q99717 465 aaKnown RBP19.73■□□□□ 0.75
TRIM47-207ENST00000593089 CHRNA10Q9GZZ6 450 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 TXLNGQ9NUQ3 528 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 IFT80Q9P2H3 777 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-207ENST00000593089 KLHL20Q9Y2M5 609 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 CAPN6Q9Y6Q1 641 aa19.73■□□□□ 0.75
TRIM47-207ENST00000593089 USP9XQ93008 2570 aaPredicted RBP19.73■□□□□ 0.75
TRIM47-207ENST00000593089 USP9YO00507 2555 aaPredicted RBP19.72■□□□□ 0.75
TRIM47-207ENST00000593089 STIP1P31948 543 aaKnown RBP19.72■□□□□ 0.75
TRIM47-207ENST00000593089 CCR7P32248 378 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 FOXL2P58012 376 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 HSPA14Q0VDF9 509 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 SEMA3AQ14563 771 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 KIR2DS3Q14952 304 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 PRUNE1Q86TP1 453 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 VRK3Q8IV63 474 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 TXLNBQ8N3L3 684 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 DNAJC22Q8N4W6 341 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 LMNTD1Q8N9Z9 388 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 OR6P1Q8NGX9 317 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 OR4L1Q8NH43 312 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 CFAP61Q8NHU2 1237 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 PNPLA2Q96AD5 504 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 RANBP9Q96S59 729 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 AP1M1Q9BXS5 423 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 CIDEBQ9UHD4 219 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 SRPK3Q9UPE1 567 aa19.72■□□□□ 0.75
TRIM47-207ENST00000593089 F8W8V4 182 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 PEX12O00623 359 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 LIASO43766 372 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 SUN1O94901 812 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 ADRA1DP25100 572 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 PKLRP30613 574 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 FDFT1P37268 417 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 PRAMEP78395 509 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 OASLQ15646 514 aaKnown RBP19.71■□□□□ 0.75
TRIM47-207ENST00000593089 FASTKD1Q53R41 847 aaKnown RBP19.71■□□□□ 0.75
TRIM47-207ENST00000593089 DNAJC21Q5F1R6 531 aaKnown RBP19.71■□□□□ 0.75
TRIM47-207ENST00000593089 SEL1L2Q5TEA6 688 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 TLDC1Q6P9B6 456 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 ZNF534Q76KX8 674 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 SLC22A15Q8IZD6 547 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 C2orf73Q8N5S3 287 aaPredicted RBP19.71■□□□□ 0.75
TRIM47-207ENST00000593089 CLEC1AQ8NC01 280 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 LKAAEAR1Q8TD35 194 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 FER1L6-AS2Q96M78 137 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 IP6K3Q96PC2 410 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 NDC1Q9BTX1 674 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 PLCL2Q9UPR0 1127 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 ZNF148Q9UQR1 794 aa19.71■□□□□ 0.75
TRIM47-207ENST00000593089 IQCF5A8MTL0 148 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 TCP11X1B4DZS4 312 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 MASP2O00187 686 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 CNOT3O75175 753 aaKnown RBP19.7■□□□□ 0.74
TRIM47-207ENST00000593089 ETS1P14921 441 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 MAGP20916 626 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 RAB28P51157 221 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 SNX1Q13596 522 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 NKAIN1Q4KMZ8 207 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 DCAF10Q5QP82 559 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 VWA5B1Q5TIE3 1220 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 HIST2H2BCQ6DN03 193 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 LDB1Q86U70 411 aaPredicted RBP19.7■□□□□ 0.74
TRIM47-207ENST00000593089 TAX1BP1Q86VP1 789 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 TMEM151BQ8IW70 566 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 LINC01555Q8NAE3 123 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 OR2Y1Q8NGV0 311 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 C1orf54Q8WWF1 131 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 IL17FQ96PD4 163 aa19.7■□□□□ 0.74
TRIM47-207ENST00000593089 TSSK1BQ9BXA7 367 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms