RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 IGDCC3Q8IVU1 814 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 ZBED8Q8IZ13 594 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 ADGRF3Q8IZF5 1079 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 NLGN4XQ8N0W4 816 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 AGGF1Q8N302 714 aaeCLIP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 C2orf73Q8N5S3 287 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 BMPERQ8N8U9 685 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 FBXO36Q8NEA4 188 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 NLGN4YQ8NFZ3 816 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 KIF18AQ8NI77 898 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 PMEPA1Q969W9 287 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 SLC22A18Q96BI1 424 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 RNF31Q96EP0 1072 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CERS2Q96G23 380 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 PPM1MQ96MI6 270 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 TUBB2BQ9BVA1 445 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 RAB11FIP5Q9BXF6 653 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 ULBP3Q9BZM4 244 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CPNE5Q9HCH3 593 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 SAYSD1Q9NPB0 183 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 LATS2Q9NRM7 1088 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 FAM114A2Q9NRY5 505 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 FGF21Q9NSA1 209 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 IRAK4Q9NWZ3 460 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 TAS2R13Q9NYV9 303 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 TRMT6Q9UJA5 497 aaKnown RBP9.76□□□□□ -0.85
BRCA1-227ENST00000591849 SERTAD3Q9UJW9 196 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 ACSL6Q9UKU0 697 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 POMT2Q9UKY4 750 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 ICKQ9UPZ9 632 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 CDYLQ9Y232 598 aa9.76□□□□□ -0.85
BRCA1-227ENST00000591849 SPAG6O75602 509 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 KIAA0754O94854 1291 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 C1orf105O95561 183 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 SYF2O95926 243 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 CATP04040 527 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 FGF5P12034 268 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 UGT2B7P16662 529 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 ATP5DP30049 168 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 PKLRP30613 574 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 SKIV2L2P42285 1042 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 BDKRB1P46663 353 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 RGS4P49798 205 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 PLTPP55058 493 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 TUBB4BP68371 445 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 MGAT5Q09328 741 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 GPR19Q15760 415 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 SPESP1Q6UW49 350 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 C6orf15Q6UXA7 325 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 KIAA0408Q6ZU52 694 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 TRIM73Q86UV7 250 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 TAX1BP1Q86VP1 789 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 TMEM126BQ8IUX1 230 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 D2HGDHQ8N465 521 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 ESX1Q8N693 406 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 GPATCH11Q8N954 259 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 C2CD4AQ8NCU7 369 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 OR8K5Q8NH50 307 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 KCNJ9Q92806 393 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 NKD1Q969G9 470 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 IL17FQ96PD4 163 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 TRAPPC9Q96Q05 1148 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 NDNQ99608 321 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 GPR21Q99679 349 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 NRTNQ99748 197 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 AARSD1Q9BTE6 412 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 EFHD1Q9BUP0 239 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 INTS7Q9NVH2 962 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 SIDT1Q9NXL6 827 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 ZFATQ9P243 1243 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 TXNDC16Q9P2K2 825 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 KLHL42Q9P2K6 505 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 GALPQ9UBC7 116 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 RUVBL2Q9Y230 463 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 DHRS7Q9Y394 339 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 NFS1Q9Y697 457 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 TEX264Q9Y6I9 313 aa9.75□□□□□ -0.85
BRCA1-227ENST00000591849 ZFC3H1O60293 1989 aaKnown RBP9.75□□□□□ -0.85
BRCA1-227ENST00000591849 KIF26BQ2KJY2 2108 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 A0A0J9YY10 115 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CTAGE15A4D2H0 777 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 ZNF839A8K0R7 811 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-227ENST00000591849 RASGRF2O14827 1237 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 EIF3HO15372 352 aaKnown RBP eCLIP9.74□□□□□ -0.85
BRCA1-227ENST00000591849 ZBTB14O43829 449 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 AHSGP02765 367 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 MT-ND3P03897 115 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CTAGE8P0CG41 777 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CBSLP0DN79 551 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 ENO3P13929 434 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-227ENST00000591849 PVRP15151 417 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 ST6GAL1P15907 406 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CYP2A7P20853 494 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 SAT1P21673 171 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CD9P21926 228 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 MCM3P25205 808 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 CBSP35520 551 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 SLC7A5Q01650 507 aa9.74□□□□□ -0.85
BRCA1-227ENST00000591849 PDAP1Q13442 181 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms