RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 HSD11B2P80365 405 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 IL11RAQ14626 422 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 KYNUQ16719 465 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 KLHL38Q2WGJ6 581 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 ACSBG2Q5FVE4 666 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 LRRC8EQ6NSJ5 796 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 CEACAM20Q6UY09 585 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 LRRC69Q6ZNQ3 347 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 CEP128Q6ZU80 1094 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 CYS1Q717R9 158 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 CCDC25Q86WR0 208 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 RAB42Q8N4Z0 105 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 KCNE4Q8WWG9 221 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 RAD51AP1Q96B01 352 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 DCBLD2Q96PD2 775 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 NDNQ99608 321 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 SLC30A3Q99726 388 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 MENTQ9BUN1 341 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 PITPNM3Q9BZ71 974 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 DPH1Q9BZG8 443 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 TWSG1Q9GZX9 223 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 TSPYL1Q9H0U9 437 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 ZDHHC18Q9NUE0 388 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 ACTR10Q9NZ32 417 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 FOXJ2Q9P0K8 574 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 SLC17A6Q9P2U8 582 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 TRMT6Q9UJA5 497 aaKnown RBP11.53□□□□□ -0.56
LIG3-213ENST00000590630 B3GALT1Q9Y5Z6 326 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 NFS1Q9Y697 457 aa11.53□□□□□ -0.56
LIG3-213ENST00000590630 TCRBV9S1A1TA0A576 114 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 STMND1H3BQB6 276 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 RASGRF2O14827 1237 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 POLR1CO15160 346 aaPredicted RBP11.52□□□□□ -0.57
LIG3-213ENST00000590630 MAP3K7O43318 606 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 PSIP1O75475 530 aaKnown RBP11.52□□□□□ -0.57
LIG3-213ENST00000590630 SPAG6O75602 509 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 CATP04040 527 aaKnown RBP11.52□□□□□ -0.57
LIG3-213ENST00000590630 MPC1LP0DKB6 136 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 SPTBP11277 2137 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 CDH3P22223 829 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 SSTR1P30872 391 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 MAGEA4P43358 317 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 FOXM1Q08050 763 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 CUL1Q13616 776 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 GRB7Q14451 532 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 KIR2DS3Q14952 304 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 RBM20Q5T481 1227 aaKnown RBP11.52□□□□□ -0.57
LIG3-213ENST00000590630 ANKS6Q68DC2 871 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 SPESP1Q6UW49 350 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 CAPN12Q6ZSI9 719 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 C3orf62Q6ZUJ4 267 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 STRA8Q7Z7C7 330 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 CDKL2Q92772 493 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 SLC22A18Q96BI1 424 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 NRTNQ99748 197 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 MTRF1LQ9UGC7 380 aaKnown RBP11.52□□□□□ -0.57
LIG3-213ENST00000590630 DMGDHQ9UI17 866 aaKnown RBP11.52□□□□□ -0.57
LIG3-213ENST00000590630 SLC39A10Q9ULF5 831 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 PLAGL1Q9UM63 463 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 RUVBL2Q9Y230 463 aaKnown RBP11.52□□□□□ -0.57
LIG3-213ENST00000590630 BTRCQ9Y297 605 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 PSAT1Q9Y617 370 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 CHD6Q8TD26 2715 aa11.52□□□□□ -0.57
LIG3-213ENST00000590630 MSL3P1P0C860 447 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 LIPCP11150 499 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 UGT2B7P16662 529 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 MCM3P25205 808 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 STX2P32856 288 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 BDKRB1P46663 353 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 RGS4P49798 205 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 CDKN2DP55273 166 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 SH3BP2P78314 561 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 TIAL1Q01085 375 aaKnown RBP eCLIP11.51□□□□□ -0.57
LIG3-213ENST00000590630 ACY1Q03154 408 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 TUBB3Q13509 450 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 TMTC4Q5T4D3 741 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 HECTD2Q5U5R9 776 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 FAM45BPQ6NSW5 357 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 BPHLQ86WA6 291 aaPredicted RBP11.51□□□□□ -0.57
LIG3-213ENST00000590630 ZC3HC1Q86WB0 502 aaKnown RBP11.51□□□□□ -0.57
LIG3-213ENST00000590630 SPACA3Q8IXA5 215 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 CPNE9Q8IYJ1 553 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 GPATCH11Q8N954 259 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 LINC01555Q8NAE3 123 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 FBXO15Q8NCQ5 510 aaPredicted RBP11.51□□□□□ -0.57
LIG3-213ENST00000590630 OR2L8Q8NGY9 312 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 HMGCLL1Q8TB92 370 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 FAM45AQ8TCE6 357 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 ASB11Q8WXH4 323 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 PMEPA1Q969W9 287 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 OR2A14Q96R47 310 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 OR6C1Q96RD1 312 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 CTRCQ99895 268 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 APMAPQ9HDC9 416 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 PDE7BQ9NP56 450 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 SOHLH2Q9NX45 425 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 SPATA7Q9P0W8 599 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 TXNDC16Q9P2K2 825 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 LNPEPQ9UIQ6 1025 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms