RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TRIM39Q9HCM9 518 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 DNAJC11Q9NVH1 559 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 ATXN10Q9UBB4 475 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 KLQ9UEF7 1012 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 CD207Q9UJ71 328 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 RNF11Q9Y3C5 154 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 L3MBTL1Q9Y468 752 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 MTCH2Q9Y6C9 303 aa8.55□□□□□ -1.04
SMAD4-206ENST00000588860 CACNA1BQ00975 2339 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 C9JVG2 144 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 SLC28A1O00337 649 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 LIN7AO14910 233 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 RGS14O43566 566 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 AP1G1O43747 822 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 VEGFDO43915 354 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 NRP2O60462 931 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 LILRB5O75023 590 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 PSIP1O75475 530 aaKnown RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 RNASEH2AO75792 299 aaKnown RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 MATN4O95460 622 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 CLDN9O95484 217 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 KLF8O95600 359 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 EGFP01133 1207 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF8P17098 575 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 ITPKAP23677 461 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 NTSR1P30989 418 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 CTHP32929 405 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 KIR2DL1P43626 348 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 MAPK9P45984 424 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 DIO3P55073 304 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 MTTPP55157 894 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 TAS2R38P59533 333 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 ACTR3P61158 418 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 STARD3Q14849 445 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 ABRAXAS2Q15018 415 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 PON2Q15165 354 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 IMPG1Q17R60 797 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 PTCHD3Q3KNS1 767 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 PDCD4Q53EL6 469 aaKnown RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 C2orf27AQ580R0 203 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 SDE2Q6IQ49 451 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 KIAA1211LQ6NV74 962 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 LAYNQ6UX15 382 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 HEATR4Q86WZ0 1026 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 HPS6Q86YV9 775 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 FUNDC1Q8IVP5 155 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 CFAP206Q8IYR0 622 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 SLC22A15Q8IZD6 547 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 FNDC5Q8NAU1 212 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 PLA2G15Q8NCC3 412 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 SMRP1Q8NCR6 262 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 OR2T3Q8NH03 318 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 FOXJ1Q92949 421 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 HLA-CQ95604 372 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 CDRT15Q96T59 188 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 HBEGFQ99075 208 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 ATG10Q9H0Y0 220 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 SDR39U1Q9NRG7 319 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 ADA2Q9NZK5 511 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 NOP53Q9NZM5 478 aaKnown RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 SERGEFQ9UGK8 458 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 PACSIN3Q9UKS6 424 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF490Q9ULM2 529 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 TMEM98Q9Y2Y6 226 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 POLR3HQ9Y535 204 aaPredicted RBP8.54□□□□□ -1.04
SMAD4-206ENST00000588860 GPR45Q9Y5Y3 372 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 CFAP54Q96N23 3096 aa8.54□□□□□ -1.04
SMAD4-206ENST00000588860 FANCMQ8IYD8 2048 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PRR23AA6NEV1 266 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 H3BM21 787 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 LSM1O15116 133 aaKnown RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ANGPT2O15123 496 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 SLC22A3O75751 556 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 POP7O75817 140 aaKnown RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 KRT6AP02538 564 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 KRT6BP04259 564 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 EPORP19235 508 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 POU3F3P20264 500 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PDHA2P29803 388 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 DPP6P42658 865 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 KRT6CP48668 564 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 MRPL19P49406 292 aaKnown RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ERFP50548 548 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 CCR3P51677 355 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 THOP1P52888 689 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 KCNK10P57789 538 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 SESN3P58005 492 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 UFM1P61960 85 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 EMX2Q04743 252 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 CCNIQ14094 377 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 LRP8Q14114 963 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF423Q2M1K9 1284 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 WSCD2Q2TBF2 565 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 ZNF658BQ4V348 819 aaPredicted RBP8.53□□□□□ -1.04
SMAD4-206ENST00000588860 SLC44A4Q53GD3 710 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PIGGQ5H8A4 983 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 C6orf136Q5SQH8 315 aa8.53□□□□□ -1.04
SMAD4-206ENST00000588860 PNCKQ6P2M8 343 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms