RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.15□□□□□ -0.78
TPM4-209ENST00000588483 A0A0J9YY10 115 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 C21orf140B9A014 251 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 EIF3FO00303 357 aaPredicted RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 RASGRF2O14827 1237 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 PRICKLE3O43900 615 aaPredicted RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 NIPSNAP2O75323 286 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 C1QL1O75973 258 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 SEC31AO94979 1220 aaKnown RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 FKBP9O95302 570 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 C1orf105O95561 183 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 CD9P21926 228 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 FMO4P31512 558 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 CCNFP41002 786 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 SLC1A2P43004 574 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 PAFAH1B1P43034 410 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 CLCN7P51798 805 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 DR1Q01658 176 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 MC1RQ01726 317 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 DHX9Q08211 1270 aaKnown RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 FRG1Q14331 258 aaKnown RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 GPR19Q15760 415 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 LINC00303Q3SY05 128 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 MSS51Q4VC12 460 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 IZUMO3Q5VZ72 239 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 HIBCHQ6NVY1 386 aaPredicted RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 NEK10Q6ZWH5 1172 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 DENND6AQ8IWF6 608 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 OTUD6BQ8N6M0 293 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 C19orf47Q8N9M1 422 aaKnown RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 LINC01555Q8NAE3 123 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.14□□□□□ -0.79
TPM4-209ENST00000588483 GALNT6Q8NCL4 622 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 OR2L8Q8NGY9 312 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 RAD51AP1Q96B01 352 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 SLC22A18Q96BI1 424 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 LRRC39Q96DD0 335 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 TCTN2Q96GX1 697 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 CATSPER2Q96P56 530 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 FAM167BQ9BTA0 163 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 FANCEQ9HB96 536 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 PLAC1Q9HBJ0 212 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 SOHLH2Q9NX45 425 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 SPHK1Q9NYA1 384 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 IL1RAPL1Q9NZN1 696 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 LNPEPQ9UIQ6 1025 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 PADI1Q9ULC6 663 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 CRYL1Q9Y2S2 319 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 KLK4Q9Y5K2 254 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 MAD1L1Q9Y6D9 718 aa10.14□□□□□ -0.79
TPM4-209ENST00000588483 SPENQ96T58 3664 aaKnown RBP10.14□□□□□ -0.79
TPM4-209ENST00000588483 FER1L5A0AVI2 2057 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 NDC80O14777 642 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 MAP3K7O43318 606 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 PSIP1O75475 530 aaKnown RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 SCRG1O75711 98 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 CCNYL3P0C7X3 344 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 ERGP11308 486 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 F8A1P23610 371 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 RORAP35398 523 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 CSE1LP55060 971 aaKnown RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 ETF1P62495 437 aaKnown RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 ABRQ12979 859 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 CTBP1Q13363 440 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 THOC5Q13769 683 aaKnown RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 ZIC1Q15915 447 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 TAF1BQ53T94 588 aaPredicted RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 SPANXN3Q5MJ09 141 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 STEAP4Q687X5 459 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 ZNF549Q6P9A3 640 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 FBXO38Q6PIJ6 1188 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 CDHR3Q6ZTQ4 885 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 KIAA0408Q6ZU52 694 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 KCNMB4Q86W47 210 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 KLHL7Q8IXQ5 586 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 PDIK1LQ8N165 341 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 ZBTB2Q8N680 514 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 FBXO15Q8NCQ5 510 aaPredicted RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 C2CD4AQ8NCU7 369 aaPredicted RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 OR1L3Q8NH93 324 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 GIMAP7Q8NHV1 300 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 GSDMBQ8TAX9 411 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 MAGEC3Q8TD91 643 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 STARD8Q92502 1023 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 ELMO2Q96JJ3 720 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 FOPNLQ96NB1 174 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 WDR83Q9BRX9 315 aaKnown RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 C20orf96Q9NUD7 363 aaPredicted RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 SPATA7Q9P0W8 599 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 IL17BQ9UHF5 180 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 KCND3Q9UK17 655 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 CROTQ9UKG9 612 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 FBXO5Q9UKT4 447 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 PLAGL1Q9UM63 463 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 TDRKHQ9Y2W6 561 aaKnown RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 NFS1Q9Y697 457 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 TEX264Q9Y6I9 313 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 ZNF462Q96JM2 2506 aa10.13□□□□□ -0.79
TPM4-209ENST00000588483 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
TPM4-209ENST00000588483 TMEM150CB9EJG8 249 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms