RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 LURAP1LQ8IV03 231 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 TBC1D21Q8IYX1 336 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 IQCKQ8N0W5 287 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 UBL4BQ8N7F7 174 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 LMNTD1Q8N9Z9 388 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 GLIS1Q8NBF1 620 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 TTC13Q8NBP0 860 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 OR5K2Q8NHB8 316 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 FER1L6-AS2Q96M78 137 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
HDAC5-208ENST00000588419 NDC1Q9BTX1 674 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 LACRTQ9GZZ8 138 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 POLG2Q9UHN1 485 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 R3HDM2Q9Y2K5 976 aaKnown RBP13.22□□□□□ -0.29
HDAC5-208ENST00000588419 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
HDAC5-208ENST00000588419 AP1M2Q9Y6Q5 423 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 CACNA1DQ01668 2161 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 HIVEP3Q5T1R4 2406 aa13.22□□□□□ -0.29
HDAC5-208ENST00000588419 USP9YO00507 2555 aaPredicted RBP13.22□□□□□ -0.29
HDAC5-208ENST00000588419 KDM1AO60341 852 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 OR1I1O60431 355 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 ZNF189O75820 626 aaPredicted RBP13.21□□□□□ -0.29
HDAC5-208ENST00000588419 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.29
HDAC5-208ENST00000588419 GAS8O95995 478 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 ALPPP05187 535 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 MAGP20916 626 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 ALAS2P22557 587 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 PEBP1P30086 187 aaKnown RBP13.21□□□□□ -0.29
HDAC5-208ENST00000588419 FOXN2P32314 431 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 SSPNQ14714 243 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 RHBDD2Q6NTF9 364 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 RAD9BQ6WBX8 426 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 HPS6Q86YV9 775 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 TMEM151BQ8IW70 566 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 GALNT16Q8N428 558 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 CISD2Q8N5K1 135 aaKnown RBP13.21□□□□□ -0.29
HDAC5-208ENST00000588419 PROKR1Q8TCW9 393 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 ATG4AQ8WYN0 398 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 IL17FQ96PD4 163 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 GBP5Q96PP8 586 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 PANX2Q96RD6 677 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 C19orf43Q9BQ61 176 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 P4HTMQ9NXG6 502 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.21□□□□□ -0.29
HDAC5-208ENST00000588419 SLC2A6Q9UGQ3 507 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 SRPK3Q9UPE1 567 aa13.21□□□□□ -0.29
HDAC5-208ENST00000588419 UTP20O75691 2785 aaKnown RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 TCRBV7S2A1N4TA0A589 114 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 E7EVH7 732 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 PSMD3O43242 534 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 GOT2P00505 430 aaKnown RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 IFNB1P01574 187 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 TPBGLP0DKB5 382 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 ITGA3P26006 1051 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 ACADLP28330 430 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 GLRBP48167 497 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 GABRA4P48169 554 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 HSPA14Q0VDF9 509 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 ELOAQ14241 798 aaKnown RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 PLEKHN1Q494U1 663 aaPredicted RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 DCAF10Q5QP82 559 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 AFTPHQ6ULP2 937 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 PACS1Q6VY07 963 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 TTLL10Q6ZVT0 673 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 LINC00523Q86TU6 105 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 METTL27Q8N6F8 245 aaPredicted RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 LRRC57Q8N9N7 239 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 OR6P1Q8NGX9 317 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 LKAAEAR1Q8TD35 194 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 HDAC10Q969S8 669 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 SNRNP40Q96DI7 357 aaKnown RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 CALR3Q96L12 384 aaKnown RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 IP6K3Q96PC2 410 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 TTC1Q99614 292 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 AP1M1Q9BXS5 423 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 ASF1BQ9NVP2 202 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 OR6C2Q9NZP2 312 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 TSR3Q9UJK0 312 aaKnown RBP13.2□□□□□ -0.3
HDAC5-208ENST00000588419 CDC23Q9UJX2 597 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 PLCL2Q9UPR0 1127 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 B3GNT3Q9Y2A9 372 aa13.2□□□□□ -0.3
HDAC5-208ENST00000588419 SLC5A10A0PJK1 596 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 HEATR9A2RTY3 570 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 MROH6A6NGR9 719 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 IQCF5A8MTL0 148 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 BHMG1C9JSJ3 638 aaPredicted RBP13.19□□□□□ -0.3
HDAC5-208ENST00000588419 CNOT3O75175 753 aaKnown RBP13.19□□□□□ -0.3
HDAC5-208ENST00000588419 VARSP26640 1264 aaKnown RBP13.19□□□□□ -0.3
HDAC5-208ENST00000588419 COL8A1P27658 744 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 PKLRP30613 574 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 ZNF75DP51815 510 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 PRAMEP78395 509 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 CDH17Q12864 832 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 MYBPC3Q14896 1274 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 KIR2DS3Q14952 304 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 SLC5A12Q1EHB4 618 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 TLDC1Q6P9B6 456 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 SHISA6Q6ZSJ9 500 aa13.19□□□□□ -0.3
HDAC5-208ENST00000588419 PPP1R32Q7Z5V6 425 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms