RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 N4BP2L2Q92802 583 aaPredicted RBP18.12■□□□□ 0.49
TRIM47-205ENST00000587774 TTC1Q99614 292 aa18.12■□□□□ 0.49
TRIM47-205ENST00000587774 CHRNA10Q9GZZ6 450 aa18.12■□□□□ 0.49
TRIM47-205ENST00000587774 CDYLQ9Y232 598 aa18.12■□□□□ 0.49
TRIM47-205ENST00000587774 IQCF5A8MTL0 148 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 KRT86O43790 486 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 CEACAM4O75871 244 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 ZSCAN5DPP0CG00 497 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 AGXTP21549 392 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 PKLRP30613 574 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 SRSF1Q07955 248 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRIM47-205ENST00000587774 HSPA14Q0VDF9 509 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 SIX1Q15475 284 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-205ENST00000587774 NADK2Q4G0N4 442 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 C1orf189Q5VU69 101 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 PAPD7Q5XG87 772 aaKnown RBP18.11■□□□□ 0.49
TRIM47-205ENST00000587774 LDB1Q86U70 411 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-205ENST00000587774 ZBTB2Q8N680 514 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 PPHLN1Q8NEY8 458 aaKnown RBP18.11■□□□□ 0.49
TRIM47-205ENST00000587774 FDCSPQ8NFU4 85 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 PEX13Q92968 403 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 SGSM3Q96HU1 749 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 MENTQ9BUN1 341 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 AP1M1Q9BXS5 423 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 PAK5Q9P286 719 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 MARCH4Q9P2E8 410 aaPredicted RBP18.11■□□□□ 0.49
TRIM47-205ENST00000587774 PADI2Q9Y2J8 665 aa18.11■□□□□ 0.49
TRIM47-205ENST00000587774 CPAMD8Q8IZJ3 1885 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 ISM1B1AKI9 464 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 F8W8V4 182 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 ZSCAN9O15535 394 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-205ENST00000587774 KLF7O75840 302 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-205ENST00000587774 CBSLP0DN79 551 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 CBSP35520 551 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 RAB28P51157 221 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 ATP1A4Q13733 1029 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 KIR2DS3Q14952 304 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 SLC5A12Q1EHB4 618 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 DNAJC21Q5F1R6 531 aaKnown RBP18.1■□□□□ 0.49
TRIM47-205ENST00000587774 MEI1Q5TIA1 1274 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 RHBDD2Q6NTF9 364 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 NLRP9Q7RTR0 991 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 ATCAYQ86WG3 371 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 FAM20CQ8IXL6 584 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 KRT222Q8N1A0 295 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 LINC01555Q8NAE3 123 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 GBP5Q96PP8 586 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 NUDT9Q9BW91 350 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 TSSK1BQ9BXA7 367 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 SPRTNQ9H040 489 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-205ENST00000587774 CATSPERZQ9NTU4 200 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 ANKMY1Q9P2S6 941 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 CIDEBQ9UHD4 219 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 AP1M2Q9Y6Q5 423 aa18.1■□□□□ 0.49
TRIM47-205ENST00000587774 CNTRLQ7Z7A1 2325 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 TTLL8A6PVC2 850 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 ZNF185O15231 689 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 KDM1AO60341 852 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 GPC4O75487 556 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 ATXN8OSP0DMR3 200 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 MAGP20916 626 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 OTX2P32243 289 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 RPL22P35268 128 aaKnown RBP18.09■□□□□ 0.49
TRIM47-205ENST00000587774 CRADDP78560 199 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 RPS6KA1Q15418 735 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 AARS2Q5JTZ9 985 aaKnown RBP18.09■□□□□ 0.49
TRIM47-205ENST00000587774 RAB43Q86YS6 212 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 DCUN1D3Q8IWE4 304 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 ZNF655Q8N720 491 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-205ENST00000587774 LMNTD1Q8N9Z9 388 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 PROKR1Q8TCW9 393 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 ASZ1Q8WWH4 475 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 DHRS4Q9BTZ2 278 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 EIF2B3Q9NR50 452 aaKnown RBP18.09■□□□□ 0.49
TRIM47-205ENST00000587774 CHRAC1Q9NRG0 131 aa18.09■□□□□ 0.49
TRIM47-205ENST00000587774 DHCR7Q9UBM7 475 aaKnown RBP18.09■□□□□ 0.49
TRIM47-205ENST00000587774 A6NL46 340 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 GOLGA6L6A8MZA4 724 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 SORBS2O94875 1100 aaKnown RBP18.08■□□□□ 0.48
TRIM47-205ENST00000587774 PPARGP37231 505 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-205ENST00000587774 UQCRFS1P47985 274 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 SESN2P58004 480 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-205ENST00000587774 GRB7Q14451 532 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 SLC9A5Q14940 896 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 KYNUQ16719 465 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 MLIPQ5VWP3 458 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 UNC5DQ6UXZ4 953 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 MED25Q71SY5 747 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 MRGPREQ86SM8 312 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 TAX1BP1Q86VP1 789 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 DNAJC22Q8N4W6 341 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 C2orf73Q8N5S3 287 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-205ENST00000587774 TMEM102Q8N9M5 508 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-205ENST00000587774 CFAP61Q8NHU2 1237 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 CPT1CQ8TCG5 803 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 UBE2Q2Q8WVN8 375 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 C17orf62Q9BQA9 187 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 TREX1Q9NSU2 369 aa18.08■□□□□ 0.48
TRIM47-205ENST00000587774 IRAK4Q9NWZ3 460 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms