RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 GNAZP19086 355 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CXCR2P25025 360 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CA5AP35218 305 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CLCNKAP51800 687 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CDH13P55290 713 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 C21orf59P57076 290 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 LAPTM5Q13571 262 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 NAA25Q14CX7 972 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PLCL1Q15111 1095 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 RPS6KA2Q15349 733 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 TEAD4Q15561 434 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CYP2A13Q16696 494 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PHKG1Q16816 387 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 KIF19Q2TAC6 998 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 ATP6AP1LQ52LC2 224 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 KANK2Q63ZY3 851 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 AGTRAPQ6RW13 159 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 MTDHQ86UE4 582 aaKnown RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 PARGQ86W56 976 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 TBC1D21Q8IYX1 336 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 FAM9CQ8IZT9 166 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 TMEM151AQ8N4L1 468 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CADM4Q8NFZ8 388 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 OR9A1PQ8NGU1 263 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 OR6Y1Q8NGX8 325 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 OR5K2Q8NHB8 316 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 METTL6Q8TCB7 284 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 TFGQ92734 400 aaPredicted RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 UBE2E3Q969T4 207 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 TUBGCP3Q96CW5 907 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CXorf40BQ96DE9 158 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CMTM5Q96DZ9 223 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 KLHDC7BQ96G42 594 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PPP1R36Q96LQ0 422 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 RMDN2Q96LZ7 410 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 RAB3IPQ96QF0 476 aaPredicted RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 FERD3LQ96RJ6 166 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 UHRF1Q96T88 793 aaPredicted RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 MIPEPQ99797 713 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 HAUS8Q9BT25 410 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PRR14Q9BWN1 585 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PCBD2Q9H0N5 130 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 ELOVL6Q9H5J4 265 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 C6orf106Q9H6K1 298 aaPredicted RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 MVB12BQ9H7P6 319 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 NOL11Q9H8H0 719 aaKnown RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 MEAF6Q9HAF1 191 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 CD248Q9HCU0 757 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 SAR1AQ9NR31 198 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 ABCF3Q9NUQ8 709 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 IMP3Q9NV31 184 aaKnown RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 PNPOQ9NVS9 261 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 SPATA6Q9NWH7 488 aaPredicted RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 NDE1Q9NXR1 346 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 GPRC5BQ9NZH0 403 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 EBF1Q9UH73 591 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 MUTYHQ9UIF7 546 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 ZDHHC2Q9UIJ5 367 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 PTBP2Q9UKA9 531 aaKnown RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 CNOT6Q9ULM6 557 aaKnown RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 PSMD13Q9UNM6 376 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 KCNK6Q9Y257 313 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 TRAF6Q9Y4K3 522 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 KCNE2Q9Y6J6 123 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 SPAG17Q6Q759 2223 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 LAMA2P24043 3122 aaKnown RBP6.03□□□□□ -1.44
LIG3-206ENST00000586058 CDH23Q9H251 3354 aa6.03□□□□□ -1.44
LIG3-206ENST00000586058 IGHV1OR15-9A0A0B4J2B8 117 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 TMEM202A6NGA9 273 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 OR5K4A6NMS3 321 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 RNF223E7ERA6 249 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 E9PBE3 544 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 SLC28A1O00337 649 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 FCHO1O14526 889 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 UBDO15205 165 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 SGTAO43765 313 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 KLHL41O60662 606 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 LILRB5O75023 590 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ULK1O75385 1050 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 UBOX5O94941 541 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 C1orf105O95561 183 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CEACAM5P06731 702 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 FGF4P08620 206 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 GNSP15586 552 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 LBPP18428 481 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 TSPAN8P19075 237 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CALB2P22676 271 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CD27P26842 260 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 MAPK1P28482 360 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 CD38P28907 300 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 EPHA3P29320 983 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ADSLP30566 484 aaPredicted RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 GRK3P35626 688 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 GGT5P36269 586 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 HNF4AP41235 474 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 ACTR1BP42025 376 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 DPP6P42658 865 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 PPM1FP49593 454 aaPredicted RBP6.02□□□□□ -1.45
LIG3-206ENST00000586058 AGTR2P50052 363 aa6.02□□□□□ -1.45
LIG3-206ENST00000586058 IDH3AP50213 366 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms