RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SFRP1Q8N474 314 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 PHC3Q8NDX5 983 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 PRSS33Q8NF86 280 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 LRRC8CQ8TDW0 803 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 ZFPM2Q8WW38 1151 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 EGFL8Q99944 293 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 POT1Q9NUX5 634 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 STOX2Q9P2F5 926 aaPredicted RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 RAB23Q9ULC3 237 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 COLEC10Q9Y6Z7 277 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 CUL9Q8IWT3 2517 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 TMEM131Q92545 1883 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 GPR179Q6PRD1 2367 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 CABIN1Q9Y6J0 2220 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 SRRM3A6NNA2 597 aaPredicted RBP15.68■□□□□ 0.1
SS18-226ENST00000585241 PATE3B3GLJ2 98 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 SIX3O95343 332 aaPredicted RBP15.68■□□□□ 0.1
SS18-226ENST00000585241 SLC16A8O95907 504 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 CFIP05156 583 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 EEF1DP29692 281 aaKnown RBP15.68■□□□□ 0.1
SS18-226ENST00000585241 HSD17B2P37059 387 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 AGTR2P50052 363 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 NAGLUP54802 743 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 BST1Q10588 318 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 TCEA2Q15560 299 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 LPAL2Q16609 132 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 CYP2A13Q16696 494 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 TRIM61Q5EBN2 209 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 ANKS6Q68DC2 871 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 ZCCHC23Q6ZST2 131 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 LRRC70Q7Z2Q7 622 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 LRRC56Q8IYG6 542 aaPredicted RBP15.68■□□□□ 0.1
SS18-226ENST00000585241 AVL9Q8NBF6 648 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 FAM46DQ8NEK8 389 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 OR56A3Q8NH54 315 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 HMGCLL1Q8TB92 370 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 ZNF483Q8TF39 744 aaPredicted RBP15.68■□□□□ 0.1
SS18-226ENST00000585241 ZDHHC1Q8WTX9 485 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 ZNF480Q8WV37 535 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 CAMK1GQ96NX5 476 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 ZNF317Q96PQ6 595 aaPredicted RBP15.68■□□□□ 0.1
SS18-226ENST00000585241 FERD3LQ96RJ6 166 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 HGH1Q9BTY7 390 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 TRMOQ9BU70 441 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 TWSG1Q9GZX9 223 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 DRC3Q9H069 523 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 GSTO2Q9H4Y5 243 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 UCKL1Q9NWZ5 548 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 WWOXQ9NZC7 414 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 PCTPQ9UKL6 214 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 ASB1Q9Y576 335 aa15.68■□□□□ 0.1
SS18-226ENST00000585241 KRT87PA6NCN2 255 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 E2F3O00716 465 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 ARHGAP33O14559 1287 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 NOBOXO60393 691 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 SNUPNO95149 360 aaKnown RBP15.67■□□□□ 0.1
SS18-226ENST00000585241 ANXA6P08133 673 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 SYPP08247 313 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 GIMD1P0DJR0 217 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 NEFHP12036 1026 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 PKLRP30613 574 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 ARRB2P32121 409 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 LSP1P33241 339 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 GNGT1P63211 74 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 OCRLQ01968 901 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 GALNT1Q10472 559 aaPredicted RBP15.67■□□□□ 0.1
SS18-226ENST00000585241 STX3Q13277 289 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 RCN2Q14257 317 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 HLA-BQ31612 363 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 C18orf21Q32NC0 220 aaPredicted RBP15.67■□□□□ 0.1
SS18-226ENST00000585241 TTC19Q6DKK2 380 aaPredicted RBP15.67■□□□□ 0.1
SS18-226ENST00000585241 AGTRAPQ6RW13 159 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 FRMD7Q6ZUT3 714 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 RBM12BQ8IXT5 1001 aaKnown RBP15.67■□□□□ 0.1
SS18-226ENST00000585241 SLC25A45Q8N413 288 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 SUMF1Q8NBK3 374 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 PPP1R14CQ8TAE6 165 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 SLC37A2Q8TED4 501 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 CXorf40BQ96DE9 158 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 CNDP1Q96KN2 507 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 RAB11FIP5Q9BXF6 653 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 CD244Q9BZW8 370 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 CPNE7Q9UBL6 633 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 HAO1Q9UJM8 370 aa15.67■□□□□ 0.1
SS18-226ENST00000585241 LRRC14BA6NHZ5 514 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 ZNF839A8K0R7 811 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 KDM1AO60341 852 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 SDC3O75056 442 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 STK16O75716 305 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 CER1O95813 267 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 RETP07949 1114 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 FASLGP48023 281 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 HSPA7P48741 367 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 RAB28P51157 221 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 PNLIPRP1P54315 467 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 ABCE1P61221 599 aaKnown RBP15.66■□□□□ 0.1
SS18-226ENST00000585241 BNIP3Q12983 259 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 PRKG2Q13237 762 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 PTCHD3Q3KNS1 767 aa15.66■□□□□ 0.1
SS18-226ENST00000585241 C6orf132Q5T0Z8 1188 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms