RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 AKAP10O43572 662 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 EEDO75530 441 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ESRRBO95718 433 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 HGFP14210 728 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ATP6V1B1P15313 513 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CDH2P19022 906 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 COL9A1P20849 921 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 MYF6P23409 242 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TTKP33981 857 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 DRD3P35462 400 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CDK9P50750 372 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ATXN3P54252 364 aaPredicted RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CDH13P55290 713 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 KCNK10P57789 538 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RPS14P62263 151 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RCAN2Q14206 197 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ACOX1Q15067 660 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 FXNQ16595 210 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 PDCD4Q53EL6 469 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TBCELQ5QJ74 424 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TMTC4Q5T4D3 741 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CYP2R1Q6VVX0 501 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RPS27LQ71UM5 84 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TRMT11Q7Z4G4 463 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ARHGAP22Q7Z5H3 698 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ERI1Q8IV48 349 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 SPNS2Q8IVW8 549 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 DDIASQ8IXT1 998 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 AADATQ8N5Z0 425 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 SCAMP4Q969E2 229 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 SLC29A1Q99808 456 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 YTHDF1Q9BYJ9 559 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 FAM83DQ9H4H8 585 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RIC8BQ9NVN3 520 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ZIM2Q9NZV7 527 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 POLG2Q9UHN1 485 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 NDRG2Q9UN36 371 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 DUSP12Q9UNI6 340 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CEPT1Q9Y6K0 416 aa14.66□□□□□ -0.06
CDK5RAP3-236ENST00000584991 A0A087WXM4 84 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TRBV5-4A0A0C4DH59 114 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 A0A1W2PQF6 199 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 FXYD1O00168 92 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 VPS26AO75436 327 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CRCPO75575 148 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RHOBTB1O94844 696 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ADH1BP00325 375 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ETS2P15036 469 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RPS6KA3P51812 740 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 GPR33Q49SQ1 333 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ATP13A5Q4VNC0 1218 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 XKR7Q5GH72 579 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ZNF776Q68DI1 518 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 LAYNQ6UX15 382 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CERS6Q6ZMG9 384 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 FKBP9P1Q75LS8 142 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TECPR1Q7Z6L1 1165 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 PROSER1Q86XN7 944 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TBC1D21Q8IYX1 336 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 MAFAQ8NHW3 353 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RPLP0P6Q8NHW5 317 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 LZICQ8WZA0 190 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 BIRC8Q96P09 236 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CIB1Q99828 191 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 MKRN2Q9H000 416 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 TUBB1Q9H4B7 451 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 AIG1Q9NVV5 245 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RSL24D1Q9UHA3 163 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CIDEBQ9UHD4 219 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 LEF1Q9UJU2 399 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 PCDHGB4Q9UN71 923 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 COQ6Q9Y2Z9 468 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 PCDHGB5Q9Y5G0 923 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CCDC160A6NGH7 325 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 H0Y858 1186 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 GIPC1O14908 333 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CAPN3P20807 821 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ATP6V1B2P21281 511 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 C5AR1P21730 350 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 ACRV1P26436 265 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 EEF1DP29692 281 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 PTGER3P43115 390 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CCINQ13939 588 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 GK3PQ14409 553 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 MLF2Q15773 248 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 VPS26BQ4G0F5 336 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 FBXO43Q4G163 708 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 PIP5KL1Q5T9C9 394 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 UGT3A1Q6NUS8 523 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 SPRED1Q7Z699 444 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 HDDC3Q8N4P3 179 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 OR56A4Q8NGH8 313 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 RAB7BQ96AH8 199 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CCDC97Q96F63 343 aaPredicted RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 PDLIM5Q96HC4 596 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 SLC6A17Q9H1V8 727 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 CA14Q9ULX7 337 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 FADS3Q9Y5Q0 445 aa14.65□□□□□ -0.06
CDK5RAP3-236ENST00000584991 A0A1W2PP55 124 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms