RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 MATN2O00339 956 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 BTN3A1O00481 513 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 PHGDHO43175 533 aaKnown RBP13.47□□□□□ -0.25
TRAF4-215ENST00000584944 MT-CO3P00414 261 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 S100BP04271 92 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-215ENST00000584944 ZNF37AP17032 561 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-215ENST00000584944 HSD17B3P37058 310 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 HSD17B2P37059 387 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 BDKRB1P46663 353 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 CAPZBP47756 277 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 SP140Q13342 867 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 NR1D2Q14995 579 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 GIMAP7Q8NHV1 300 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 AENQ8WTP8 325 aaKnown RBP13.47□□□□□ -0.25
TRAF4-215ENST00000584944 CAVIN3Q969G5 261 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 MTBPQ96DY7 904 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 TGM7Q96PF1 710 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 SLC30A3Q99726 388 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 VPS11Q9H270 941 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
TRAF4-215ENST00000584944 CTNNAL1Q9UBT7 734 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 KLHL3Q9UH77 587 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 ZNF180Q9UJW8 692 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 ATXN7L1Q9ULK2 861 aaPredicted RBP13.47□□□□□ -0.25
TRAF4-215ENST00000584944 ACOT9Q9Y305 439 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 IGSF10Q6WRI0 2623 aa13.47□□□□□ -0.25
TRAF4-215ENST00000584944 ZFC3H1O60293 1989 aaKnown RBP13.46□□□□□ -0.25
TRAF4-215ENST00000584944 TLDC2A0PJX2 215 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 FAM149AA5PLN7 773 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 C2orf74A8MZ97 194 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 B4GAT1O43505 415 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 CSO75390 466 aaKnown RBP13.46□□□□□ -0.25
TRAF4-215ENST00000584944 MATN4O95460 622 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 C1orf105O95561 183 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 SNRPAP09012 282 aaKnown RBP13.46□□□□□ -0.25
TRAF4-215ENST00000584944 CCDC166P0CW27 439 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 KRT15P19012 456 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 CD1CP29017 333 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 RAB28P51157 221 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 INHBCP55103 352 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 INSM1Q01101 510 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-215ENST00000584944 CYP4F3Q08477 520 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 ZNF460Q14592 562 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 FAM83EQ2M2I3 478 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 FBXO38Q6PIJ6 1188 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 WDR74Q6RFH5 385 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-215ENST00000584944 CEP97Q8IW35 865 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 OR4D9Q8NGE8 314 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 HNRNPLLQ8WVV9 542 aaKnown RBP13.46□□□□□ -0.25
TRAF4-215ENST00000584944 ASB11Q8WXH4 323 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 SLC22A18Q96BI1 424 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 TXLNGYQ9BZA5 131 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 XKR8Q9H6D3 395 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 PARVBQ9HBI1 364 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 OR6C2Q9NZP2 312 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 FETUBQ9UGM5 382 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 TBK1Q9UHD2 729 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 CIDEBQ9UHD4 219 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 RAB21Q9UL25 225 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 PLAGL1Q9UM63 463 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 MED16Q9Y2X0 877 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 NFS1Q9Y697 457 aa13.46□□□□□ -0.25
TRAF4-215ENST00000584944 PIKFYVEQ9Y2I7 2098 aa13.46□□□□□ -0.26
TRAF4-215ENST00000584944 PIPSLA2A3N6 862 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 OR5K3A6NET4 321 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 A8MU76 341 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ISM1B1AKI9 464 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 TRIM49D1C9J1S8 452 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 SLC16A5O15375 505 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 CAPN5O15484 640 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 PSIP1O75475 530 aaKnown RBP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 POLR2CP19387 275 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 CSTF2P33240 577 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 SLCO1A2P46721 670 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 KPNA2P52292 529 aaKnown RBP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ATP6V0D1P61421 351 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 CSHL1Q14406 222 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 GBX1Q14549 363 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 NAA30Q147X3 362 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 SOWAHCQ53LP3 525 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 UBAP2Q5T6F2 1119 aaKnown RBP13.45□□□□□ -0.26
TRAF4-215ENST00000584944 THEMIS2Q5TEJ8 643 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ANKS6Q68DC2 871 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 TMEM71Q6P5X7 295 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 CMC1Q7Z7K0 106 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ADAMTSL2Q86TH1 951 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 SYTL1Q8IYJ3 562 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 OR9A1PQ8NGU1 263 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 GRAMD1AQ96CP6 724 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 RUFY1Q96T51 708 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 EGFL8Q99944 293 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 NUDT22Q9BRQ3 303 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 NMRAL1Q9HBL8 299 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 SNX15Q9NRS6 342 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ABCF3Q9NUQ8 709 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ARL15Q9NXU5 204 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ENTPD2Q9Y5L3 495 aa13.45□□□□□ -0.26
TRAF4-215ENST00000584944 ARHGEF17Q96PE2 2063 aaPredicted RBP13.44□□□□□ -0.26
TRAF4-215ENST00000584944 A0A096LPK6 155 aa13.44□□□□□ -0.26
TRAF4-215ENST00000584944 A0A1W2PQM1 296 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms