RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ZDHHC7Q9NXF8 308 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 HEY2Q9UBP5 337 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 FBXL17Q9UF56 701 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 C2CD2Q9Y426 696 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 SCN10AQ9Y5Y9 1956 aa1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNFX1Q9P2E3 1918 aaKnown RBP1.9□□□□□ -2.1
SMCHD1-211ENST00000584897 A0A1W2PRG0 241 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM90A8PA6NJQ4 464 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 NPIPB13A6NJU9 1138 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 NPIPB5A8MRT5 1133 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 RSPH10B2B2RC85 870 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 NPIPB4C9JG80 1138 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 F8W810 466 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 AGPSO00116 658 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 HS3ST1O14792 307 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SEC14L5O43304 696 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 PRKAB2O43741 272 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 NOL3O60936 208 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 DAB1O75553 588 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 PSMD10O75832 226 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 AKAP3O75969 853 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 TJP3O95049 919 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SNAI1O95863 264 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 LGALS2P05162 132 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CLTAP09496 248 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM90A13PP0C7W8 464 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM90A24PP0C7X0 464 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 RSPH10BP0C881 870 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CPA3P15088 417 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 FERP16591 822 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 DRD4P21917 467 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 NDUFS1P28331 727 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 EPHB2P29323 1055 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 TACR3P29371 465 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 HOXA13P31271 388 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 TLX1P31314 330 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ALDH7A1P49419 539 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CLCNKBP51801 687 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 GMFBP60983 142 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 B4GALNT1Q00973 533 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 TIAL1Q01085 375 aaKnown RBP eCLIP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CEBPZQ03701 1054 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 LRRC63Q05C16 580 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 KRTAP1-1Q07627 177 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 NAE1Q13564 534 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 HNRNPDQ14103 355 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 AASDHQ4L235 1098 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ERMARDQ5T6L9 678 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 VWA5B1Q5TIE3 1220 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ZBTB49Q6ZSB9 765 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 MTSS1LQ765P7 747 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 TAOK1Q7L7X3 1001 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 LMNTD2Q8IXW0 634 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 DCP1BQ8IZD4 617 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SYCP3Q8IZU3 236 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SUMF1Q8NBK3 374 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC2A12Q8TD20 617 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ACER1Q8TDN7 264 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ST7LQ8TDW4 575 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 GRK7Q8WTQ7 553 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 IGFBPL1Q8WX77 278 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 KRT35Q92764 455 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 OTUB2Q96DC9 234 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 RSPRY1Q96DX4 576 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 DHTKD1Q96HY7 919 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 GDAP1L1Q96MZ0 367 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 WDFY2Q96P53 400 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 LRRC3BQ96PB8 259 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 GSDMAQ96QA5 445 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 TGS1Q96RS0 853 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CTAGE1Q96RT6 745 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ABHD1Q96SE0 405 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 XPO4Q9C0E2 1151 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SEMA4BQ9NPR2 832 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CWC15Q9P013 229 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ACAD8Q9UKU7 415 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CMAHPQ9Y471 501 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 PCDHGA5Q9Y5G8 931 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 MYO5AQ9Y4I1 1855 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 C17orf113A0A1B0GUU1 675 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 GLOD5A6NK44 160 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 H3BNX3 289 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC9A3R1O14745 358 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 TSPAN1O60635 241 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 GMNNO75496 209 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ERLIN2O94905 339 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 LUC7L3O95232 432 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 MT-CYBP00156 380 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SBK2P0C263 348 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CYP2B6P20813 491 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 CMA1P23946 247 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 ITPKBP27987 946 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC8A3P57103 927 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 PPP2R2BQ00005 443 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 GFPT1Q06210 699 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 FOXI1Q12951 378 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 PTP4A2Q12974 167 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC39A14Q15043 492 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 PTPN14Q15678 1187 aa1.9□□□□□ -2.11
SMCHD1-211ENST00000584897 KYNUQ16719 465 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms