RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 MLLT1Q03111 559 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 POU5F1BQ06416 359 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ART3Q13508 389 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MBTPS1Q14703 1052 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TIGD7Q6NT04 549 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CASC4Q6P4E1 433 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 STRADAQ7RTN6 431 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SLC22A9Q8IVM8 553 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 LNX2Q8N448 690 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 NAT16Q8N8M0 369 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FAM71DQ8N9W8 422 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZMIZ2Q8NF64 920 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ELP4Q96EB1 424 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 GAD1Q99259 594 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SORT1Q99523 831 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 APOL4Q9BPW4 351 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PAAF1Q9BRP4 392 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZCCHC2Q9C0B9 1178 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PCDHAC1Q9H158 963 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 MIOSQ9NXC5 875 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 DPP3Q9NY33 737 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CLEC4AQ9UMR7 237 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 INVSQ9Y283 1065 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TRPV2Q9Y5S1 764 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PIAS3Q9Y6X2 628 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SCN10AQ9Y5Y9 1956 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 C3orf70A6NLC5 250 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RTCAO00442 366 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TLL1O43897 1013 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 NRP2O60462 931 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 BRINP1O60477 761 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TMEM63AO94886 807 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FTH1P02794 183 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 INHBAP08476 426 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 LTA4HP09960 611 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RRASP10301 218 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FNTBP49356 437 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 HK3P52790 923 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PER3P56645 1201 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 RPL10AP62906 217 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CBX2Q14781 532 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TAB1Q15750 504 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 GRK1Q15835 563 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CYP27C1Q4G0S4 372 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 TAF2Q6P1X5 1199 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PRMT9Q6P2P2 845 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FBXO46Q6PJ61 603 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PLD3Q8IV08 490 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PDIK1LQ8N165 341 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 KLHL36Q8N4N3 616 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 HASPINQ8TF76 798 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 SCLYQ96I15 445 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZNF251Q9BRH9 671 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PAPOLGQ9BWT3 736 aaKnown RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 GPR63Q9BZJ6 419 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 XYLT2Q9H1B5 865 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ATP13A1Q9HD20 1204 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 CATSPERZQ9NTU4 200 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ZNF639Q9UID6 485 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 PCDHGB6Q9Y5F9 930 aa11.65□□□□□ -0.54
CDK5RAP3-232ENST00000584168 ABCD4O14678 606 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 PCDH17O14917 1159 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 CABYRO75952 493 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 SNX4O95219 450 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 POMCP01189 267 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 LCKP06239 509 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 C2P06681 752 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 SLC1A6P48664 564 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 CCL23P55773 120 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 SLC10A2Q12908 348 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 ZNF404Q494X3 552 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 HSD17B12Q53GQ0 312 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 TIGD3Q6B0B8 471 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 R3HCC1LQ7Z5L2 792 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 TMEM199Q8N511 208 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 ZBTB18Q99592 522 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 ING2Q9H160 280 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 SOX17Q9H6I2 414 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 PNPOQ9NVS9 261 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 SMPD3Q9NY59 655 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 ADA2Q9NZK5 511 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 BFARQ9NZS9 450 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 OPTCQ9UBM4 332 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 TRHDEQ9UKU6 1024 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 LOC390937A0A1W2PQ73 354 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 TRABD2BA6NFA1 517 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 MOXD2PA6NHM9 499 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 APOL3O95236 402 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 CKBP12277 381 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 SLC2A4P14672 509 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 CRHBPP24387 322 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 PSMA2P25787 234 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 CTNNB1P35222 781 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 NRLP54845 237 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 NCS1P62166 190 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 RBP5P82980 135 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 STX5Q13190 355 aa11.64□□□□□ -0.55
CDK5RAP3-232ENST00000584168 TEX261Q6UWH6 196 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms