RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 EPN3Q9H201 632 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 TRIT1Q9H3H1 467 aaKnown RBP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 ERVMER34-1Q9H9K5 563 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 FGFR1OP2Q9NVK5 253 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 WWOXQ9NZC7 414 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 TNPO3Q9Y5L0 923 aaKnown RBP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 EDF1O60869 148 aaKnown RBP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 CHRNGP07510 517 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 MTHFD1P11586 935 aaKnown RBP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 CTSKP43235 329 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 HSPA7P48741 367 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 HNRNPKP61978 463 aaKnown RBP eCLIP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 PRKG2Q13237 762 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 ARL13AQ5H913 290 aaPredicted RBP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 TTC23LQ6PF05 361 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 PRR23BQ6ZRT6 265 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 LSMEM2Q8N112 164 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 OR9A1PQ8NGU1 263 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 NSUN5Q96P11 429 aaKnown RBP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 FERD3LQ96RJ6 166 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 CD244Q9BZW8 370 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 STOX2Q9P2F5 926 aaPredicted RBP17.65■□□□□ 0.42
NDEL1-217ENST00000583683 PCTPQ9UKL6 214 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 SNX11Q9Y5W9 270 aa17.65■□□□□ 0.42
NDEL1-217ENST00000583683 IMPA1P29218 277 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 HOXD12P35452 270 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 GDF5P43026 501 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 NUBP1P53384 320 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 CDH13P55290 713 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 ELOCQ15369 112 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 ANKS6Q68DC2 871 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 ZNF483Q8TF39 744 aaPredicted RBP17.64■□□□□ 0.41
NDEL1-217ENST00000583683 C7orf26Q96N11 449 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 PITPNM3Q9BZ71 974 aa17.64■□□□□ 0.41
NDEL1-217ENST00000583683 ZNF624Q9P2J8 865 aaPredicted RBP17.64■□□□□ 0.41
NDEL1-217ENST00000583683 TDRKHQ9Y2W6 561 aaKnown RBP17.64■□□□□ 0.41
NDEL1-217ENST00000583683 TSPAN8P19075 237 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 SERPINB5P36952 375 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 SLC6A12P48065 614 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 METTL2BQ6P1Q9 378 aaKnown RBP17.63■□□□□ 0.41
NDEL1-217ENST00000583683 IYDQ6PHW0 289 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 AGTRAPQ6RW13 159 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 ZNF548Q8NEK5 533 aaPredicted RBP17.63■□□□□ 0.41
NDEL1-217ENST00000583683 PPP4R1Q8TF05 950 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 ZNF480Q8WV37 535 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 ATL1Q8WXF7 558 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 HGH1Q9BTY7 390 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 MENTQ9BUN1 341 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 ATG10Q9H0Y0 220 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 MVB12BQ9H7P6 319 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 ZBTB26Q9HCK0 441 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 SPASTQ9UBP0 616 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 HEBP2Q9Y5Z4 205 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 PRAMEF33A0A0G2JMD5 474 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 STK16O75716 305 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 HSPA4LO95757 839 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 CLCQ05315 142 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 LPAL2Q16609 132 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 PTCHD3Q3KNS1 767 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 FAM46DQ8NEK8 389 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 LMX1AQ8TE12 382 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 PYCR2Q96C36 320 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 TRMOQ9BU70 441 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 RABEP2Q9H5N1 569 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 PLAGL1Q9UM63 463 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 ADAMTS9Q9P2N4 1935 aa17.63■□□□□ 0.41
NDEL1-217ENST00000583683 PPP6CO00743 305 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 UBFD1O14562 309 aaKnown RBP17.62■□□□□ 0.41
NDEL1-217ENST00000583683 AQP9O43315 295 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 CCNT2O60583 730 aaKnown RBP17.62■□□□□ 0.41
NDEL1-217ENST00000583683 DRD4P21917 467 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 SLC19A1P41440 591 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 NAA20P61599 178 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 GALNT1Q10472 559 aaPredicted RBP17.62■□□□□ 0.41
NDEL1-217ENST00000583683 SFTPA2Q8IWL1 248 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 NAGSQ8N159 534 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 PPFIBP2Q8ND30 876 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 PATE1Q8WXA2 126 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 CAMK1GQ96NX5 476 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 NRTNQ99748 197 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 FAM107BQ9H098 131 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 SEMA4BQ9NPR2 832 aaPredicted RBP17.62■□□□□ 0.41
NDEL1-217ENST00000583683 OPTCQ9UBM4 332 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 POLG2Q9UHN1 485 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 COLEC10Q9Y6Z7 277 aa17.62■□□□□ 0.41
NDEL1-217ENST00000583683 TRBV23OR9-2A0A075B6M9 112 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 K7EPI3 171 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 SDC3O75056 442 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 PIAS2O75928 621 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 ERGP11308 486 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 DPP6P42658 865 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 GTF2H2Q13888 395 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 KRT33BQ14525 404 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 DUOXA1Q1HG43 343 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 CGB2Q6NT52 195 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 GTF2H2CQ6P1K8 395 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 GKN2Q86XP6 184 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 ZNF781Q8N8C0 355 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 OR56A3Q8NH54 315 aa17.61■□□□□ 0.41
NDEL1-217ENST00000583683 TRPC4APQ8TEL6 797 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms