RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FFAR3O14843 346 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 AREL1O15033 823 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 GPR42O15529 346 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 TSPAN6O43657 245 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 LZTS3O60299 673 aaPredicted RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 PSIP1O75475 530 aaKnown RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 HSD17B1P14061 328 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 SLC2A4P14672 509 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 JAK1P23458 1154 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 GTF2H3Q13889 308 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 TMEM52BQ4KMG9 183 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 ERN2Q76MJ5 926 aaKnown RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 NLRP8Q86W28 1048 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 FAM9CQ8IZT9 166 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 BEND7Q8N7W2 519 aaPredicted RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 FAM156AQ8NDB6 213 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 PROKR1Q8TCW9 393 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 N4BP2L2Q92802 583 aaPredicted RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 KCNK12Q9HB15 430 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 IL1RL2Q9HB29 575 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 TRPV5Q9NQA5 729 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 CCL27Q9Y4X3 112 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 TCF20Q9UGU0 1960 aaKnown RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 CLNS1AP54105 237 aaKnown RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 RPL38P63173 70 aaKnown RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 CREB5Q02930 508 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 MESP2Q0VG99 397 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 PTCHD3Q3KNS1 767 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 BCL7AQ4VC05 210 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 FAM46CQ5VWP2 391 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 IRGCQ6NXR0 463 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 TMEM220Q6QAJ8 160 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 RNF111Q6ZNA4 994 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 DHFR2Q86XF0 187 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 GLB1L3Q8NCI6 653 aaPredicted RBP22.09■■□□□ 1.13
CCDC47-204ENST00000582252 FAM129BQ96TA1 746 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 P2RY13Q9BPV8 354 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 EFHD1Q9BUP0 239 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 LRTM1Q9HBL6 345 aa22.09■■□□□ 1.13
CCDC47-204ENST00000582252 SLC5A10A0PJK1 596 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 INPP4BO15327 924 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 SPINT1O43278 529 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 RECQL5O94762 991 aaPredicted RBP22.08■■□□□ 1.12
CCDC47-204ENST00000582252 G6PDP11413 515 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 GPR1P46091 355 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 ZFP36L2P47974 494 aaKnown RBP22.08■■□□□ 1.12
CCDC47-204ENST00000582252 RHDQ02161 417 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 DPTQ07507 201 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 PUS10Q3MIT2 529 aaKnown RBP22.08■■□□□ 1.12
CCDC47-204ENST00000582252 ZNF648Q5T619 568 aaPredicted RBP22.08■■□□□ 1.12
CCDC47-204ENST00000582252 RAET1GQ6H3X3 334 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 PTCRAQ6ISU1 281 aaPredicted RBP22.08■■□□□ 1.12
CCDC47-204ENST00000582252 KBTBD2Q8IY47 623 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 L3MBTL4Q8NA19 623 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 CXorf40AQ8TE69 158 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 ZUFSPQ96AP4 578 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 CHFRQ96EP1 664 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 ZNF514Q96K75 400 aaPredicted RBP22.08■■□□□ 1.12
CCDC47-204ENST00000582252 TEX37Q96LM6 180 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 CCDC138Q96M89 665 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 HBEGFQ99075 208 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 SLC39A3Q9BRY0 314 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 ELOVL6Q9H5J4 265 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 THAP10Q9P2Z0 257 aaPredicted RBP22.08■■□□□ 1.12
CCDC47-204ENST00000582252 LIMD1Q9UGP4 676 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 LRRK1Q38SD2 2015 aa22.08■■□□□ 1.12
CCDC47-204ENST00000582252 PRSS51A0A1B0GVH4 220 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 C9JVG2 144 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 FXYD1O00168 92 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 NME4O00746 187 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 LIN7AO14910 233 aaPredicted RBP22.07■■□□□ 1.12
CCDC47-204ENST00000582252 UGDHO60701 494 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 C6P13671 934 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 GRIA2P42262 883 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 CTSCP53634 463 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 ZNF33BQ06732 778 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 TIGD2Q4W5G0 525 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 RFTN2Q52LD8 501 aaPredicted RBP22.07■■□□□ 1.12
CCDC47-204ENST00000582252 OGFRL1Q5TC84 451 aaPredicted RBP22.07■■□□□ 1.12
CCDC47-204ENST00000582252 IRAK1BP1Q5VVH5 260 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 SELENOMQ8WWX9 145 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 DUS3LQ96G46 650 aaKnown RBP22.07■■□□□ 1.12
CCDC47-204ENST00000582252 HDAC8Q9BY41 377 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 PCDHAC1Q9H158 963 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 C1orf109Q9NX04 203 aa22.07■■□□□ 1.12
CCDC47-204ENST00000582252 KAT7O95251 611 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 APODP05090 189 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 SLC6A2P23975 617 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 KLC1Q07866 573 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 TLR1Q15399 786 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 PDSS2Q86YH6 399 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 SLC15A3Q8IY34 581 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 SLC22A15Q8IZD6 547 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 DPP10Q8N608 796 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 DNASE1L2Q92874 299 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 VPS33AQ96AX1 596 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 COQ6Q9Y2Z9 468 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 TCRBV3S1A0A5B6 114 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 SERTM1A2A2V5 107 aa22.06■■□□□ 1.12
CCDC47-204ENST00000582252 SEC22BO75396 215 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms