RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 BLOC1S4Q9NUP1 217 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 MTUS1Q9ULD2 1270 aa2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 PTRH2Q9Y3E5 179 aaKnown RBP2.85□□□□□ -1.95
SMCHD1-206ENST00000581631 A0A1W2PN81 502 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 PRAMEF11O60813 436 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 AVILO75366 819 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 BCL10O95999 233 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 DUX4L4P0CJ87 422 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 CHRNA7P36544 502 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 MAGEA11P43364 429 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 NRIP1P48552 1158 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 CDK3Q00526 305 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 PRKCZQ05513 592 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 FAM205BPQ63HN1 556 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 TMPRSS11FQ6ZWK6 438 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 CEP57Q86XR8 500 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 CEP57L1Q8IYX8 460 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 ARHGAP24Q8N264 748 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 Q8N377 158 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 AFAP1Q8N556 730 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 POC5Q8NA72 575 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 IRGQQ8WZA9 623 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 SUSD6Q92537 303 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 MAGED4Q96JG8 741 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 NEK1Q96PY6 1258 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 SDF4Q9BRK5 362 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 LMF2Q9BU23 707 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 KIFC3Q9BVG8 833 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 NUP85Q9BW27 656 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 GHITMQ9H3K2 345 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 OSGEPL1Q9H4B0 414 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 SDR39U1Q9NRG7 319 aaPredicted RBP2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 TAB2Q9NYJ8 693 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 ADD3Q9UEY8 706 aaKnown RBP2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 TBC1D29Q9UFV1 150 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 ZDHHC2Q9UIJ5 367 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 TUBE1Q9UJT0 475 aa2.84□□□□□ -1.95
SMCHD1-206ENST00000581631 ZNF644Q9H582 1327 aaPredicted RBP2.84□□□□□ -1.96
SMCHD1-206ENST00000581631 COL4A4P53420 1690 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 ADAMDEC1O15204 470 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 MED24O75448 989 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 GPIP06744 558 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 GJA1P17302 382 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 TRIM21P19474 475 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 HOXD13P35453 343 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 PSMC6P62333 389 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 NR1D2Q14995 579 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 TEAD2Q15562 447 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 PHLDA2Q53GA4 152 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 DHRS7BQ6IAN0 325 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 PAQR6Q6TCH4 344 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 LRRTM1Q86UE6 522 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 TMEM139Q8IV31 216 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 PAPD5Q8NDF8 572 aaKnown RBP2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 MOSPD2Q8NHP6 518 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 OLFM1Q99784 485 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 TREX2Q9BQ50 279 aaPredicted RBP2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 SYT15Q9BQS2 421 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 PIGQQ9BRB3 760 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 BTBD10Q9BSF8 475 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 P2RY12Q9H244 342 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 CACNG4Q9UBN1 327 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 VPS28Q9UK41 221 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 GRIP1Q9Y3R0 1128 aa2.83□□□□□ -1.96
SMCHD1-206ENST00000581631 ANKUB1A6NFN9 424 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 OR10H2O60403 315 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 DUS4LO95620 317 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 CSH1P0DML2 217 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 CSH2P0DML3 217 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 CA6P23280 308 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 DNASE1P24855 282 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 SLC6A6P31641 620 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 TRA2BP62995 288 aaKnown RBP2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 CHAF1BQ13112 559 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 WTAPQ15007 396 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 KLHL26Q53HC5 615 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 KRT79Q5XKE5 535 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 ITPRIPL1Q6GPH6 555 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 TMEM211Q6ICI0 200 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF343Q6P1L6 599 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 PSRC1Q6PGN9 363 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 ADIPOR2Q86V24 386 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 TMEM173Q86WV6 379 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 LINC00346Q8IVM7 164 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 C11orf53Q8IXP5 236 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 RPAP2Q8IXW5 612 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 CDK20Q8IZL9 346 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 RAB42Q8N4Z0 105 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 OMA1Q96E52 524 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 FNBP1Q96RU3 617 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 MMP27Q9H306 513 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 ZNF701Q9NV72 531 aaPredicted RBP2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 RNF186Q9NXI6 227 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 PSD3Q9NYI0 1048 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 B3GAT1Q9P2W7 334 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 DAPK2Q9UIK4 370 aa2.82□□□□□ -1.96
SMCHD1-206ENST00000581631 LOC102723996A0A087X1L8 192 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 A0A1W2PPR1 153 aa2.81□□□□□ -1.96
SMCHD1-206ENST00000581631 hCG_1807616A0A1W2PRN6 198 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms