RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 ZIM2Q9NZV7 527 aa14.27□□□□□ -0.12
CSNK1D-217ENST00000581241 ALG5Q9Y673 324 aa14.27□□□□□ -0.12
CSNK1D-217ENST00000581241 ISPDA4D126 451 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 ITGB1P05556 798 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 ACADVLP49748 655 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 C4orf46Q504U0 113 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 EPGNQ6UW88 154 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 CAND1Q86VP6 1230 aaKnown RBP14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 RGL4Q8IZJ4 473 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 NAT16Q8N8M0 369 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 PCDH19Q8TAB3 1148 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 PLD4Q96BZ4 506 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 HSPBAP1Q96EW2 488 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 SNX27Q96L92 541 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 LRRC42Q9Y546 428 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 CLPXO76031 633 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 STOMP27105 288 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 TLR1Q15399 786 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 TSTQ16762 297 aaKnown RBP14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 TFAP2BQ92481 460 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 KAT2AQ92830 837 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 THUMPD1Q9NXG2 353 aaKnown RBP14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 SNAPC5O75971 98 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 SNHG28P0DPA3 235 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 AOC1P19801 751 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 MSANTD2Q6P1R3 559 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 USP50Q70EL3 339 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 ZNF627Q7L945 461 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 FAXDC2Q96IV6 333 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 HSD3B7Q9H2F3 369 aa14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 COL5A2P05997 1499 aaPredicted RBP14.27□□□□□ -0.13
CSNK1D-217ENST00000581241 FAM159BA6NKW6 160 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 PSMD9O00233 223 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 KLF11O14901 512 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 PGAM2P15259 253 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 IDSP22304 550 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 GRK6P43250 576 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 CDH15P55291 814 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 MC1RQ01726 317 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 EVX2Q03828 476 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 MAB21L1Q13394 359 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 AKTIPQ9H8T0 292 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 C14orf105Q9NVL8 296 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 A0A0G2JPF8 293 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 ZSCAN5BA6NJL1 495 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 HNRNPCL3B7ZW38 293 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 PDLIM1O00151 329 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 RENP00797 406 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 HNRNPCL4P0DMR1 293 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 LINGO4Q6UY18 593 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 ASB18Q6ZVZ8 466 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 NCSTNQ92542 709 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 NKD1Q969G9 470 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 CNDP2Q96KP4 475 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 POLR2J3Q9H1A7 115 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 APOBEC3GQ9HC16 384 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 MYO5BQ9ULV0 1848 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 TMEM63AO94886 807 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 APOL3O95236 402 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 RB1P06400 928 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 PSMD8P48556 350 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 CRISP3P54108 245 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 AP1S1P61966 158 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 DUSP4Q13115 394 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 MARCH9Q86YJ5 346 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 ATAD1Q8NBU5 361 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 LSM14AQ8ND56 463 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 ZFAND2BQ8WV99 257 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 CANT1Q8WVQ1 401 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 HPF1Q9NWY4 346 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 OR2AG2A6NM03 316 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 K7EPI3 171 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 LINGO3P0C6S8 592 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 MAP2K5Q13163 448 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 DGKZQ13574 1117 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 C1orf189Q5VU69 101 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 MSANTD1Q6ZTZ1 278 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 C12orf43Q96C57 262 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 ZNF317Q96PQ6 595 aaPredicted RBP14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 PCDHGA11Q9Y5H2 935 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 MAFBQ9Y5Q3 323 aaPredicted RBP14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 SHPRHQ149N8 1683 aa14.26□□□□□ -0.13
CSNK1D-217ENST00000581241 TAS2R39P59534 338 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 CDKL1Q00532 357 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 DPYSL2Q16555 572 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 ZMIZ2Q8NF64 920 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 ZNF431Q8TF32 576 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 ZBED6CLQ96FA7 236 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 DTLQ9NZJ0 730 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 TMEM131LA2VDJ0 1609 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 ZNF3P17036 446 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 HOXA10P31260 410 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 SLC18A2Q05940 514 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 TMEM126BQ8IUX1 230 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 CERS5Q8N5B7 392 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 SLC37A3Q8NCC5 494 aa14.25□□□□□ -0.13
CSNK1D-217ENST00000581241 OR5T3Q8NGG3 340 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms