RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 VPS39Q96JC1 886 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 GPR21Q99679 349 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 GPR22Q99680 433 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 RAB33BQ9H082 229 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 TFB2MQ9H5Q4 396 aaKnown RBP9.62□□□□□ -0.87
GGA3-209ENST00000580646 KIR3DX1Q9H7L2 352 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 SLC17A6Q9P2U8 582 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 POLG2Q9UHN1 485 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 TRMT6Q9UJA5 497 aaKnown RBP9.62□□□□□ -0.87
GGA3-209ENST00000580646 PSMD13Q9UNM6 376 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 SSUH2Q9Y2M2 353 aa9.62□□□□□ -0.87
GGA3-209ENST00000580646 SNRNP200O75643 2136 aaKnown RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 KIF26BQ2KJY2 2108 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 TEX51A0A1B0GUA7 166 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 FAM95CA0A1B0GW59 222 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 HGSO14964 777 aaPredicted RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 MPSTP25325 297 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 CNTFP26441 200 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 CSF2RBP32927 897 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 PPM1FP49593 454 aaPredicted RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 RGS4P49798 205 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 SERPINB9P50453 376 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 MAPK10P53779 464 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 CDKN2DP55273 166 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 CLN3Q13286 438 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 TRA2AQ13595 282 aaKnown RBP eCLIP9.61□□□□□ -0.87
GGA3-209ENST00000580646 GPR18Q14330 331 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 TMEM71Q6P5X7 295 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 EGFL6Q8IUX8 553 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 RASGRP3Q8IV61 690 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 VRK3Q8IV63 474 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 DCUN1D3Q8IWE4 304 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 CTAGE3PQ8IX95 158 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 PPM1NQ8N819 430 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 GPATCH11Q8N954 259 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 FBXO15Q8NCQ5 510 aaPredicted RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 RCBTB1Q8NDN9 531 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 PHC3Q8NDX5 983 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 SPDYE1Q8NFV5 336 aaPredicted RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 OR4D9Q8NGE8 314 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 OR10G6Q8NH81 332 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 GIMAP7Q8NHV1 300 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 MAGEC3Q8TD91 643 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 AENQ8WTP8 325 aaKnown RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 SLC44A1Q8WWI5 657 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 USP7Q93009 1102 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 CAVIN3Q969G5 261 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 TSPAN17Q96FV3 270 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 PDLIM5Q96HC4 596 aaKnown RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 AHCYL2Q96HN2 611 aaKnown RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 CCDC74BQ96LY2 380 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 FOPNLQ96NB1 174 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 UBL7Q96S82 380 aaPredicted RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 NDNQ99608 321 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 TWSG1Q9GZX9 223 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 TRIT1Q9H3H1 467 aaKnown RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 PPCSQ9HAB8 311 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 CPNE5Q9HCH3 593 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 SYTL2Q9HCH5 934 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 IMP3Q9NV31 184 aaKnown RBP9.61□□□□□ -0.87
GGA3-209ENST00000580646 GALPQ9UBC7 116 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 FAM8A1Q9UBU6 413 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 ZNF180Q9UJW8 692 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 ACSL6Q9UKU0 697 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 ASF1AQ9Y294 204 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 NAV2Q8IVL1 2488 aa9.61□□□□□ -0.87
GGA3-209ENST00000580646 MATN2O00339 956 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 SLC16A5O15375 505 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 DUX1O43812 170 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 PSIP1O75475 530 aaKnown RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 WISP3O95389 354 aaPredicted RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 F7P08709 466 aaPredicted RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 THRAP10827 490 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 CCL4P13236 92 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 ZNF37AP17032 561 aaPredicted RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 CSTF2P33240 577 aaKnown RBP eCLIP9.6□□□□□ -0.87
GGA3-209ENST00000580646 SLC26A3P40879 764 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 CAPZBP47756 277 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 VAC14Q08AM6 782 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 GPS2Q13227 327 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 SP140Q13342 867 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 BRD3Q15059 726 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 ZKSCAN8Q15776 578 aaPredicted RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 ACSBG2Q5FVE4 666 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 ARHGAP40Q5TG30 622 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 TMEM164Q5U3C3 297 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 KLHL35Q6PF15 583 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 WDR74Q6RFH5 385 aaPredicted RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 TAOK1Q7L7X3 1001 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 GSPT2Q8IYD1 628 aaKnown RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 MREGQ8N565 214 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 NKAPQ8N5F7 415 aaKnown RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 SIDT2Q8NBJ9 832 aaKnown RBP9.6□□□□□ -0.87
GGA3-209ENST00000580646 AGBL5Q8NDL9 886 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 NCSTNQ92542 709 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 RAD51AP1Q96B01 352 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 FERD3LQ96RJ6 166 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 SLC30A3Q99726 388 aa9.6□□□□□ -0.87
GGA3-209ENST00000580646 OLFM1Q99784 485 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms