RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ARSEP51690 589 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 TMPRSS15P98073 1019 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 CACNG1Q06432 222 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 FOXD4Q12950 439 aaPredicted RBP13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 ZBTB17Q13105 803 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 MMRN1Q13201 1228 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 KRT81Q14533 505 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 FAM20CQ8IXL6 584 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 KBTBD2Q8IY47 623 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 DNAJC22Q8N4W6 341 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 OR52E1Q8NGJ3 308 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 DLG3Q92796 817 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 MAGED4Q96JG8 741 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 TRABDQ9H4I3 376 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 UGT1A7Q9HAW7 530 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 UGT1A10Q9HAW8 530 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 UGT1A8Q9HAW9 530 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 ABHD10Q9NUJ1 306 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 ATRQ13535 2644 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 CPAMD8Q8IZJ3 1885 aa13.29□□□□□ -0.28
CSNK1D-211ENST00000579316 NBEAL1Q6ZS30 2694 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 VSTM2BA6NLU5 285 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 KCNK1O00180 336 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 GAPDHSO14556 408 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 SGTAO43765 313 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 WISP2O76076 250 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 ZRANB2O95218 330 aaKnown RBP eCLIP13.28□□□□□ -0.286e-6■■■■□ 21
CSNK1D-211ENST00000579316 NDST3O95803 873 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 MYBL1P10243 752 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 TBX2Q13207 712 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 ITGA9Q13797 1035 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 FAM151BQ6UXP7 276 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 TRIM73Q86UV7 250 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 SPPL2CQ8IUH8 684 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 LILRA3Q8N6C8 439 aaPredicted RBP13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 NIPA2Q8N8Q9 360 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 CCDC110Q8TBZ0 833 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 DENND1AQ8TEH3 1009 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 LRRN4Q8WUT4 740 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 MESP1Q9BRJ9 268 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.28□□□□□ -0.285e-10■■■■■ 31.1
CSNK1D-211ENST00000579316 MVB12BQ9H7P6 319 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 ZNF160Q9HCG1 818 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 ENAMQ9NRM1 1142 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 IL17CQ9P0M4 197 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 PTGFRNQ9P2B2 879 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 CTSFQ9UBX1 484 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
CSNK1D-211ENST00000579316 GLYATL1P3A0A0U1RQE8 302 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 A0A1W2PQ72 361 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 FOXO6A8MYZ6 492 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 DDX3XO00571 662 aaKnown RBP eCLIP13.27□□□□□ -0.293e-16■■■□□ 14.7
CSNK1D-211ENST00000579316 PRAMEF2O60811 474 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 PRAMEF1O95521 474 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 SERPINA7P05543 415 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 POLBP06746 335 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 PRR35P0CG20 571 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 ACPPP15309 386 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 UGT2B7P16662 529 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 MSH3P20585 1137 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 ARSFP54793 590 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 GBE1Q04446 702 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 FOLH1Q04609 750 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 SRSF11Q05519 484 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 LTBQ06643 244 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 PPIDQ08752 370 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 DPYSL3Q14195 570 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 PIGHQ14442 188 aaPredicted RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 PPP2R5EQ16537 467 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 ATP13A4Q4VNC1 1196 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 TTLL10Q6ZVT0 673 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 DET1Q7L5Y6 550 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 DAAM2Q86T65 1068 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 NT5DC3Q86UY8 548 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 HOOK3Q86VS8 718 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 FLVCR1-AS1Q8TAF5 88 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 HM13Q8TCT9 377 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 BRIX1Q8TDN6 353 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 RBM41Q96IZ5 413 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 OR2A14Q96R47 310 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 FERD3LQ96RJ6 166 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 MDFIQ99750 246 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 SLC25A51Q9H1U9 297 aa13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 SOX17Q9H6I2 414 aaPredicted RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 MRPL47Q9HD33 250 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 SNRNP200O75643 2136 aaKnown RBP13.27□□□□□ -0.29
CSNK1D-211ENST00000579316 A0A0J9YY10 115 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 DSCR3O14972 297 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 AKR1B10O60218 316 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 WDPCPO95876 746 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 FTLP02792 175 aaPredicted RBP13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 ALAS2P22557 587 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 CDC25BP30305 580 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 AKT1P31749 480 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 CD151P48509 253 aa13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 CARSP49589 748 aaKnown RBP13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 SLC10A2Q12908 348 aaPredicted RBP13.26□□□□□ -0.29
CSNK1D-211ENST00000579316 BOP1Q14137 746 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms