RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 HGH1Q9BTY7 390 aa13.52□□□□□ -0.25
PPP4R1-206ENST00000577779 CRB3Q9BUF7 120 aa13.52□□□□□ -0.25
PPP4R1-206ENST00000577779 CEP41Q9BYV8 373 aa13.52□□□□□ -0.25
PPP4R1-206ENST00000577779 MRPL47Q9HD33 250 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-206ENST00000577779 SNRNP200O75643 2136 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-206ENST00000577779 GTF3C1Q12789 2109 aa13.52□□□□□ -0.25
PPP4R1-206ENST00000577779 FN1P02751 2386 aaKnown RBP13.52□□□□□ -0.25
PPP4R1-206ENST00000577779 CPAMD8Q8IZJ3 1885 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 NSG1A0A0A6YYJ2 146 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 A0A0J9YY10 115 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 BHMG1C9JSJ3 638 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 FAM227AF5H4B4 570 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 IFRD1O00458 451 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 ONECUT2O95948 504 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 IGFBP2P18065 325 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 NSG1P42857 185 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 CARSP49589 748 aaKnown RBP13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 IFI35P80217 286 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 GBE1Q04446 702 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 FOLH1Q04609 750 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 CACNG1Q06432 222 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 DPYSL3Q14195 570 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 PIGHQ14442 188 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 KRT31Q15323 416 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 BCL7AQ4VC05 210 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 DNAJC22Q8N4W6 341 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 DNAAF3Q8N9W5 541 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 HM13Q8TCT9 377 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 DENND1AQ8TEH3 1009 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 AGAP11Q8TF27 550 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 THAP3Q8WTV1 239 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 NINJ1Q92982 152 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 LINC00615Q96LM1 132 aaPredicted RBP13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 GPR137Q96N19 417 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 OR2A14Q96R47 310 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 SYT11Q9BT88 431 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 SLC25A51Q9H1U9 297 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 TRABDQ9H4I3 376 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 MVB12BQ9H7P6 319 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 SMOXQ9NWM0 555 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 EURLQ9NYK6 297 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 COQ3Q9NZJ6 369 aa13.51□□□□□ -0.25
PPP4R1-206ENST00000577779 GAPDHSO14556 408 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 DSCR3O14972 297 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 WFS1O76024 890 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 MLYCDO95822 493 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 SERPINA7P05543 415 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 SSR1P43307 286 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 GCGRP47871 477 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 SLC10A2Q12908 348 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 CEBPEQ15744 281 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 KRTCAP3Q53RY4 240 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 TFDP3Q5H9I0 405 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 HIBCHQ6NVY1 386 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 Q71RC1 249 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 NDUFAF7Q7L592 441 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 SPATA22Q8NHS9 363 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 FAM71BQ8TC56 605 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 PHF10Q8WUB8 498 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 RNF32Q9H0A6 362 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 TSPAN10Q9H1Z9 355 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 IL17CQ9P0M4 197 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 ICKQ9UPZ9 632 aa13.5□□□□□ -0.25
PPP4R1-206ENST00000577779 OR5H15A6NDH6 313 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 VSTM2BA6NLU5 285 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 BUD23O43709 281 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 SLCO2B1O94956 709 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 BMP10O95393 424 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 ABOP16442 354 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 OR1D4P47884 311 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 RAB28P51157 221 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 FANCCQ00597 558 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 KLC1Q07866 573 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 PPIDQ08752 370 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 BOP1Q14137 746 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 NOMO1Q15155 1222 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 SLC14A2Q15849 920 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 CES4AQ5XG92 561 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 CNSTQ6PJW8 725 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 C3P1Q6ZMU1 363 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 UNC5AQ6ZN44 842 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 NLRP9Q7RTR0 991 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 BIVMQ86UB2 503 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 PRSS58Q8IYP2 241 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 METTL27Q8N6F8 245 aaPredicted RBP13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 ZNF398Q8TD17 642 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 TADA1Q96BN2 335 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 TRIM11Q96F44 468 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 OR52A5Q9H2C5 316 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 CUTCQ9NTM9 273 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 SPHK1Q9NYA1 384 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 PPT2Q9UMR5 302 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 PKP3Q9Y446 797 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 HCFC1P51610 2035 aa13.49□□□□□ -0.25
PPP4R1-206ENST00000577779 TLN2Q9Y4G6 2542 aa13.48□□□□□ -0.25
PPP4R1-206ENST00000577779 E9PLN8 166 aa13.48□□□□□ -0.25
PPP4R1-206ENST00000577779 SGTAO43765 313 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms