RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CTNNAL1Q9UBT7 734 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 CIDEBQ9UHD4 219 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 LNPEPQ9UIQ6 1025 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 ADAMTS6Q9UKP5 1117 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 PLAAQ9Y263 795 aa13.57□□□□□ -0.24
RPAIN-217ENST00000575711 CEP250Q9BV73 2442 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 TLDC2A0PJX2 215 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 NPEPPSL1A6NEC2 478 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 PCNX2A6NKB5 2137 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 ZNF839A8K0R7 811 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 MATN2O00339 956 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 MT-CO3P00414 261 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 ENO2P09104 434 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 LTA4HP09960 611 aaKnown RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 TPBGLP0DKB5 382 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 CD1DP15813 335 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 PKLRP30613 574 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 CSF2RBP32927 897 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 HSD17B2P37059 387 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 CSRP3P50461 194 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 CCSMST1Q4G0I0 132 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 BEND6Q5SZJ8 279 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 N4BP2L1Q5TBK1 243 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 CDCP2Q5VXM1 449 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 TMEM71Q6P5X7 295 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 ADAMTSL2Q86TH1 951 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 GALNT15Q8N3T1 639 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 RIBC1Q8N443 379 aaPredicted RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 SPATA6LQ8N4H0 392 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 OR4D9Q8NGE8 314 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 CABS1Q96KC9 395 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 IL17FQ96PD4 163 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 DEPDC7Q96QD5 511 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 PKP4Q99569 1192 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 NUDT22Q9BRQ3 303 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 UNKQ9C0B0 810 aaKnown RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 RAB33BQ9H082 229 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 NMRAL1Q9HBL8 299 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 NOVA2Q9UNW9 492 aaKnown RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 CLCA2Q9UQC9 943 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 PDE10AQ9Y233 779 aa13.56□□□□□ -0.24
RPAIN-217ENST00000575711 GOLGA4Q13439 2230 aaKnown RBP13.56□□□□□ -0.24
RPAIN-217ENST00000575711 GSAPA4D1B5 854 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 KRT87PA6NCN2 255 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 CDC7O00311 574 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 BTN3A3O00478 584 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 CAPN5O15484 640 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-217ENST00000575711 MT-ND3P03897 115 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-217ENST00000575711 HOXB3P14651 431 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-217ENST00000575711 KRT15P19012 456 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 POLR2CP19387 275 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-217ENST00000575711 GMPRP36959 345 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 AP1S2P56377 157 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 IRF9Q00978 393 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 CFHR1Q03591 330 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 ARHGAP19Q14CB8 494 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 TSNQ15631 228 aaKnown RBP13.55□□□□□ -0.24
RPAIN-217ENST00000575711 FAM83EQ2M2I3 478 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 ANKS6Q68DC2 871 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 IRGCQ6NXR0 463 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 KLC3Q6P597 504 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 SBSNQ6UWP8 590 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 FRA10AC1Q70Z53 315 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 RAB44Q7Z6P3 723 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-217ENST00000575711 TMPRSS12Q86WS5 348 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 OR2L8Q8NGY9 312 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 KCTD4Q8WVF5 259 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 DLG3Q92796 817 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 ZDHHC12Q96GR4 267 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 CCDC138Q96M89 665 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 TSNARE1Q96NA8 513 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 TMEM74Q96NL1 305 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 TGM7Q96PF1 710 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 NRTNQ99748 197 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 MENTQ9BUN1 341 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 IGSF5Q9NSI5 407 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 EPHA6Q9UF33 1036 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 OARD1Q9Y530 152 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 ENTPD2Q9Y5L3 495 aa13.55□□□□□ -0.24
RPAIN-217ENST00000575711 MN1Q10571 1320 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-217ENST00000575711 PIPSLA2A3N6 862 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 C2orf74A8MZ97 194 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 TMX2-CTNND1H3BSU7 103 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 RFPL1O75677 317 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 KLHL2O95198 593 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 SLC16A8O95907 504 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 COL6A2P12110 1019 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 JUPP14923 745 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 MPSTP25325 297 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 PNLIPRP1P54315 467 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 INHBCP55103 352 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 GFERP55789 205 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 CLDN6P56747 220 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 FOXC1Q12948 553 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 DLG1Q12959 904 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 CYP2A13Q16696 494 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 PHKG1Q16816 387 aa13.54□□□□□ -0.24
RPAIN-217ENST00000575711 TSNAXIP1Q2TAA8 658 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms