RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 POLG2Q9UHN1 485 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 POMT2Q9UKY4 750 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 RUVBL2Q9Y230 463 aaKnown RBP12.86□□□□□ -0.35
RPAIN-216ENST00000575599 PCDHB11Q9Y5F2 797 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 SDK2Q58EX2 2172 aa12.86□□□□□ -0.35
RPAIN-216ENST00000575599 MATN2O00339 956 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 EIF3HO15372 352 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 TTC4O95801 387 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 RPN2P04844 631 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 EBLN1P0CF75 366 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 NELFEP18615 380 aaKnown RBP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 SHMT2P34897 504 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 ADARP55265 1226 aaKnown RBP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 TMPRSS3P57727 454 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 PDIA2Q13087 525 aaKnown RBP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 CNSTQ6PJW8 725 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 UNC5DQ6UXZ4 953 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 UNC5AQ6ZN44 842 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 VASH2Q86V25 355 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 ANKMY2Q8IV38 441 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 LMNTD2Q8IXW0 634 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 ZBTB2Q8N680 514 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 SLC41A2Q96JW4 573 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 WDR83Q9BRX9 315 aaKnown RBP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 NAT9Q9BTE0 207 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 SAYSD1Q9NPB0 183 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 PPANQ9NQ55 473 aaKnown RBP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 ACTR10Q9NZ32 417 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 GALPQ9UBC7 116 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 ZC3H7BQ9UGR2 993 aaKnown RBP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
RPAIN-216ENST00000575599 FBXO5Q9UKT4 447 aa12.85□□□□□ -0.35
RPAIN-216ENST00000575599 C2orf74A8MZ97 194 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 TP73O15350 636 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 KDM1AO60341 852 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 ZBTB11O95625 1053 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-216ENST00000575599 TPBGLP0DKB5 382 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 MYBL2P10244 700 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 PRDX3P30048 256 aaKnown RBP12.84□□□□□ -0.35
RPAIN-216ENST00000575599 BDKRB1P46663 353 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 ATP1A2P50993 1020 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 UCNP55089 124 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 SRSF6Q13247 344 aaKnown RBP12.84□□□□□ -0.35
RPAIN-216ENST00000575599 TUBB3Q13509 450 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 MANEAQ5SRI9 462 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 PLEKHS1Q5SXH7 462 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 KMT5CQ86Y97 462 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 RASGRP3Q8IV61 690 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 DCUN1D3Q8IWE4 304 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 ADGRF3Q8IZF5 1079 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 GABPB2Q8TAK5 448 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-216ENST00000575599 CERS2Q96G23 380 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 FOPNLQ96NB1 174 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 ZPBPQ9BS86 351 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 KLHL25Q9H0H3 589 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 SLC17A6Q9P2U8 582 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 NFS1Q9Y697 457 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 CFAP47Q6ZTR5 3102 aa12.84□□□□□ -0.35
RPAIN-216ENST00000575599 PIPSLA2A3N6 862 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 SLC9B1P1A6NJY1 282 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-216ENST00000575599 RAD1O60671 282 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 STK17BO94768 372 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 HAUS5O94927 633 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 CHRM5P08912 532 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-216ENST00000575599 FAM153BP0C7A2 387 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PVRP15151 417 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 FOLR1P15328 257 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 ECHS1P30084 290 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PKLRP30613 574 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 HSD11B2P80365 405 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 IL11RAQ14626 422 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 FASTKD3Q14CZ7 662 aaKnown RBP12.83□□□□□ -0.36
RPAIN-216ENST00000575599 FAM153CQ494X1 144 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 ARHGAP40Q5TG30 622 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 ZNF549Q6P9A3 640 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 CYB5D1Q6P9G0 228 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 CCDC81Q6ZN84 652 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 TRIM73Q86UV7 250 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 TAX1BP1Q86VP1 789 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 DTX1Q86Y01 620 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PALM2Q8IXS6 379 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 ZBED8Q8IZ13 594 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 IL22RA1Q8N6P7 574 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 C2CD4AQ8NCU7 369 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-216ENST00000575599 AENQ8WTP8 325 aaKnown RBP12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PYROXD1Q8WU10 500 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 CAVIN3Q969G5 261 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 LRRC39Q96DD0 335 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 IL17FQ96PD4 163 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 CCNL2Q96S94 520 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-216ENST00000575599 NDNQ99608 321 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 ULBP3Q9BZM4 244 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PHACTR1Q9C0D0 580 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PRORYQ9H606 182 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PLAC1Q9HBJ0 212 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 PDE7BQ9NP56 450 aa12.83□□□□□ -0.36
RPAIN-216ENST00000575599 C1GALT1Q9NS00 363 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms