RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 IKZF3Q9UKT9 509 aa16.59■□□□□ 0.25
NUP88-210ENST00000574867 ICKQ9UPZ9 632 aa16.59■□□□□ 0.25
NUP88-210ENST00000574867 OARD1Q9Y530 152 aa16.59■□□□□ 0.25
NUP88-210ENST00000574867 A0A1W2PPM1 405 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 ZNF839A8K0R7 811 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 UBXN7O94888 489 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 MYZAPP0CAP1 466 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 PKLRP30613 574 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 GMPRP36959 345 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 HSD17B2P37059 387 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 CAPZBP47756 277 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 NOVA1P51513 510 aaKnown RBP16.58■□□□□ 0.25
NUP88-210ENST00000574867 OR1D5P58170 312 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 CDKL1Q00532 357 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 ARHGAP19Q14CB8 494 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 CLPPQ16740 277 aaPredicted RBP16.58■□□□□ 0.25
NUP88-210ENST00000574867 PHKG1Q16816 387 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 AMIGO1Q86WK6 493 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 AHCYL2Q96HN2 611 aaKnown RBP16.58■□□□□ 0.25
NUP88-210ENST00000574867 CCDC138Q96M89 665 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 MENTQ9BUN1 341 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 UNKQ9C0B0 810 aaKnown RBP16.58■□□□□ 0.25
NUP88-210ENST00000574867 OR6C2Q9NZP2 312 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 LNPEPQ9UIQ6 1025 aa16.58■□□□□ 0.25
NUP88-210ENST00000574867 GOLGA8RI6L899 631 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 KERAO60938 352 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 SYF2O95926 243 aaKnown RBP16.58■□□□□ 0.24
NUP88-210ENST00000574867 E2F1Q01094 437 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 CCSMST1Q4G0I0 132 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 ANKS6Q68DC2 871 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 ISCA2Q86U28 154 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 OOSP2Q86WS3 158 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 Q8N9G6 341 aaPredicted RBP16.58■□□□□ 0.24
NUP88-210ENST00000574867 PTERQ96BW5 349 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 GPR78Q96P69 363 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 ALG9Q9H6U8 611 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 TOR4AQ9NXH8 423 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 RNF112Q9ULX5 631 aa16.58■□□□□ 0.24
NUP88-210ENST00000574867 APOBEC2Q9Y235 224 aaKnown RBP16.58■□□□□ 0.24
NUP88-210ENST00000574867 PCNX2A6NKB5 2137 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 MATN2O00339 956 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 GLRA3O75311 464 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 RPLP0P05388 317 aaKnown RBP16.57■□□□□ 0.24
NUP88-210ENST00000574867 PROS1P07225 676 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 TPBGLP0DKB5 382 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 ERGP11308 486 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 AMD1P17707 334 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 KRT4P19013 534 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 SQSTM1Q13501 440 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 OR4D1Q15615 310 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 SH2D5Q6ZV89 423 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 PLD6Q8N2A8 252 aaKnown RBP16.57■□□□□ 0.24
NUP88-210ENST00000574867 OR4E2Q8NGC2 313 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 OR2L8Q8NGY9 312 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 HMGCLL1Q8TB92 370 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 JPH3Q8WXH2 748 aaPredicted RBP16.57■□□□□ 0.24
NUP88-210ENST00000574867 PKP4Q99569 1192 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 DPYSL5Q9BPU6 564 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 CENPHQ9H3R5 247 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 LRRN3Q9H3W5 708 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 MKS1Q9NXB0 559 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 ARL15Q9NXU5 204 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 DCDC2Q9UHG0 476 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 PLAGL1Q9UM63 463 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 RP1P56715 2156 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 OR5K3A6NET4 321 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 SYCE1LA8MT33 242 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 B4GAT1O43505 415 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 SLC16A8O95907 504 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 RBP1P09455 135 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 PPM1FP49593 454 aaPredicted RBP16.57■□□□□ 0.24
NUP88-210ENST00000574867 SIM1P81133 766 aaPredicted RBP16.57■□□□□ 0.24
NUP88-210ENST00000574867 TGFBIQ15582 683 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 CYP2A13Q16696 494 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 CDKL4Q5MAI5 379 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 GPSM1Q86YR5 675 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 SRRM1Q8IYB3 904 aaKnown RBP16.57■□□□□ 0.24
NUP88-210ENST00000574867 ATL1Q8WXF7 558 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 RSC1A1Q92681 617 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 ZMYND15Q9H091 742 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 ABCG4Q9H172 646 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 UTP6Q9NYH9 597 aaKnown RBP16.57■□□□□ 0.24
NUP88-210ENST00000574867 DLL3Q9NYJ7 618 aa16.57■□□□□ 0.24
NUP88-210ENST00000574867 ASXL3Q9C0F0 2248 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 FOXO6A8MYZ6 492 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 DKK1O94907 266 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 KCNK5O95279 499 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 ANXA5P08758 320 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 FTH1P19P0C7X4 201 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 GLRBP48167 497 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 CCT5P48643 541 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 SLC18A2Q05940 514 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 PRKAA1Q13131 559 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 AMZ1Q400G9 498 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 TNFAIP8L3Q5GJ75 292 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 TECRLQ5HYJ1 363 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 ARMC6Q6NXE6 501 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 DENND1AQ8TEH3 1009 aa16.56■□□□□ 0.24
NUP88-210ENST00000574867 ALKBH8Q96BT7 664 aaKnown RBP16.56■□□□□ 0.24
NUP88-210ENST00000574867 SMC6Q96SB8 1091 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms