RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 NOVA2Q9UNW9 492 aaKnown RBP13.42□□□□□ -0.26
RPAIN-209ENST00000571558 ACTL7BQ9Y614 415 aa13.42□□□□□ -0.26
RPAIN-209ENST00000571558 HMGB1P1B2RPK0 211 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-209ENST00000571558 QSOX1O00391 747 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 CASC3O15234 703 aaKnown RBP13.41□□□□□ -0.26
RPAIN-209ENST00000571558 PHGDHO43175 533 aaKnown RBP13.41□□□□□ -0.26
RPAIN-209ENST00000571558 VPS26AO75436 327 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 RASGRP1O95267 797 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 ASMTLO95671 621 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 PYGBP11216 843 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 KRT4P19013 534 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 SAT1P21673 171 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 AOAHP28039 575 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 HTR1BP28222 390 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 TYK2P29597 1187 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 ATP5DP30049 168 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 CCR7P32248 378 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 GMPRP36959 345 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 SLC18A2Q05940 514 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 GBX1Q14549 363 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 DOK6Q6PKX4 331 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 VASH2Q86V25 355 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 BEND7Q8N7W2 519 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-209ENST00000571558 GOLGA6L1Q8N7Z2 621 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 KYQ8NBH2 561 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 SIDT2Q8NBJ9 832 aaKnown RBP13.41□□□□□ -0.26
RPAIN-209ENST00000571558 GPBAR1Q8TDU6 330 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 FAM136AQ96C01 138 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 TSPAN17Q96FV3 270 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 SLC12A9Q9BXP2 914 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 RMI1Q9H9A7 625 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 IGSF5Q9NSI5 407 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
RPAIN-209ENST00000571558 MKS1Q9NXB0 559 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 MAN2B2Q9Y2E5 1009 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 DHRS7Q9Y394 339 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 RELNP78509 3460 aa13.41□□□□□ -0.26
RPAIN-209ENST00000571558 A0A096LPK6 155 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 STMND1H3BQB6 276 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 GOLGA8RI6L899 631 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 TNFRSF10CO14798 259 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 CAPN5O15484 640 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-209ENST00000571558 TSPAN12O95859 305 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 FTH1P02794 183 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 CHRM3P20309 590 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 KELP23276 732 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 SLC26A3P40879 764 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 SKIV2L2P42285 1042 aaKnown RBP13.4□□□□□ -0.26
RPAIN-209ENST00000571558 ATP1A2P50993 1020 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 SLC12A2P55011 1212 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 MAGOHP61326 146 aaKnown RBP13.4□□□□□ -0.26
RPAIN-209ENST00000571558 IRF9Q00978 393 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 KCNAB2Q13303 367 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 GTF2H3Q13889 308 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 CLPPQ16740 277 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-209ENST00000571558 PAQR3Q6TCH7 311 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 CCDC91Q7Z6B0 441 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 ZFAND4Q86XD8 727 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 CENPLQ8N0S6 344 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-209ENST00000571558 C4orf33Q8N1A6 199 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 BANPQ8N9N5 519 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 GPR156Q8NFN8 814 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 OR56A4Q8NGH8 313 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 ANKRD49Q8WVL7 239 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 OR1E3Q8WZA6 343 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 USP7Q93009 1102 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 WDR92Q96MX6 357 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 PANX3Q96QZ0 392 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 CCM2Q9BSQ5 444 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 GPAMQ9HCL2 828 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 SSU72Q9NP77 194 aaKnown RBP13.4□□□□□ -0.26
RPAIN-209ENST00000571558 CDYLQ9Y232 598 aa13.4□□□□□ -0.26
RPAIN-209ENST00000571558 A0A087X1B8 175 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 C17orf113A0A1B0GUU1 675 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PRSS38A1L453 326 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PRR19A6NJB7 356 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 C9orf172C9J069 976 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 E5RI56 91 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 F8W8V4 182 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 TYROBPO43914 113 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 GSTM1P09488 218 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ZNF37AP17032 561 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 WT1P19544 449 aaPredicted RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 ITIH1P19827 911 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 CCR10P46092 362 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 CYP4F2P78329 520 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 GSTM4Q03013 218 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 DLG1Q12959 904 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PDAP1Q13442 181 aaKnown RBP13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PYCR3Q53H96 274 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 OGFOD3Q6PK18 319 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 LRRTM4Q86VH4 590 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 TRAPPC5Q8IUR0 188 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 HID1Q8IV36 788 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 INPP5DQ92835 1189 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 PDXPQ96GD0 296 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 CABS1Q96KC9 395 aa13.39□□□□□ -0.27
RPAIN-209ENST00000571558 GPR78Q96P69 363 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms