RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 F3P13726 295 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 HIST1H2ADP20671 130 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 IMPA1P29218 277 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 SLC19A1P41440 591 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 HERVK_113P63132 956 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 GABPB1Q06547 395 aaPredicted RBP19.83■□□□□ 0.77
SPSB3-211ENST00000569380 GRIK2Q13002 908 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 FASTKQ14296 549 aaKnown RBP19.83■□□□□ 0.77
SPSB3-211ENST00000569380 NAGSQ8N159 534 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 FAM46DQ8NEK8 389 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 OR5K2Q8NHB8 316 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 L3HYPDHQ96EM0 354 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 HIST1H2AHQ96KK5 128 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 HIST1H2AJQ99878 128 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 H2AFJQ9BTM1 129 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 ERVK-6Q9BXR3 956 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 TRIM54Q9BYV2 358 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 XKR8Q9H6D3 395 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 ABCF3Q9NUQ8 709 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 PCOLCE2Q9UKZ9 415 aa19.83■□□□□ 0.77
SPSB3-211ENST00000569380 EP300Q09472 2414 aaPredicted RBP19.83■□□□□ 0.76
SPSB3-211ENST00000569380 CACNA1EQ15878 2313 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 OTOGLQ3ZCN5 2332 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 MYO1CO00159 1063 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 PIAS2O75928 621 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 DEFB133Q30KQ1 61 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 SULT1C3Q6IMI6 304 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 OR9A1PQ8NGU1 263 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 SKA1Q96BD8 255 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 THOC1Q96FV9 657 aaKnown RBP19.83■□□□□ 0.76
SPSB3-211ENST00000569380 SORT1Q99523 831 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 ARRDC1-AS1Q9H2J1 176 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 TRIT1Q9H3H1 467 aaKnown RBP19.83■□□□□ 0.76
SPSB3-211ENST00000569380 ZBTB26Q9HCK0 441 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 TNFRSF12AQ9NP84 129 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 FGFR1OP2Q9NVK5 253 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 SUSD2Q9UGT4 822 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 PCTPQ9UKL6 214 aa19.83■□□□□ 0.76
SPSB3-211ENST00000569380 FAM186AA6NE01 2351 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 CCDC189A1A4V9 331 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 STX16-NPEPL1H3BU86 382 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 UBFD1O14562 309 aaKnown RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 STX16O14662 325 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 YY2O15391 372 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 AQP9O43315 295 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 CCNT2O60583 730 aaKnown RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 SHOX2O60902 331 aaPredicted RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 SNNO75324 88 aaPredicted RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 VIMP08670 466 aaKnown RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 RPS17P08708 135 aaKnown RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 SLC1A6P48664 564 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 ABCE1P61221 599 aaKnown RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 CDKL1Q00532 357 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 TCEAL6Q6IPX3 200 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 IYDQ6PHW0 289 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 WASH2PQ6VEQ5 465 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 DCUN1D3Q8IWE4 304 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 AGR3Q8TD06 166 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 ZNF480Q8WV37 535 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 TCEAL3Q969E4 200 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 FBXL8Q96CD0 374 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 CAMK1GQ96NX5 476 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 MENTQ9BUN1 341 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 FAM107BQ9H098 131 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 SEMA4BQ9NPR2 832 aaPredicted RBP19.82■□□□□ 0.76
SPSB3-211ENST00000569380 WASH6PQ9NQA3 447 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 SPASTQ9UBP0 616 aa19.82■□□□□ 0.76
SPSB3-211ENST00000569380 E2F3O00716 465 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 HALP42357 657 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 AP1S2P56377 157 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 HNRNPKP61978 463 aaKnown RBP eCLIP19.81■□□□□ 0.76
SPSB3-211ENST00000569380 PTCHD3Q3KNS1 767 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 TRIM61Q5EBN2 209 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 ARL13AQ5H913 290 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-211ENST00000569380 AGTRAPQ6RW13 159 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 RGS9BPQ6ZS82 235 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 RAB44Q7Z6P3 723 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-211ENST00000569380 GATAD2AQ86YP4 633 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 TBC1D21Q8IYX1 336 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 SLC25A45Q8N413 288 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 FBXO15Q8NCQ5 510 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-211ENST00000569380 SLC37A2Q8TED4 501 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 CCDC126Q96EE4 140 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 CCDC138Q96M89 665 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 ELF4Q99607 663 aaPredicted RBP19.81■□□□□ 0.76
SPSB3-211ENST00000569380 CAPN10Q9HC96 672 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 PCDH15Q96QU1 1955 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 LAMA1P25391 3075 aa19.81■□□□□ 0.76
SPSB3-211ENST00000569380 MPSTP25325 297 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 PRDX3P30048 256 aaKnown RBP19.8■□□□□ 0.76
SPSB3-211ENST00000569380 MAZP56270 477 aaKnown RBP19.8■□□□□ 0.76
SPSB3-211ENST00000569380 OCRLQ01968 901 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 NAE1Q13564 534 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 TSTA3Q13630 321 aaPredicted RBP19.8■□□□□ 0.76
SPSB3-211ENST00000569380 RCN2Q14257 317 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 KRT33BQ14525 404 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 ELOCQ15369 112 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 DUOXA1Q1HG43 343 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 HLA-BQ31612 363 aa19.8■□□□□ 0.76
SPSB3-211ENST00000569380 CFAP157Q5JU67 520 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms