RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 PLEKHB1Q9UF11 243 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-215ENST00000569020 PACSIN2Q9UNF0 486 aaPredicted RBP13.18□□□□□ -0.3
CNOT1-215ENST00000569020 REXO2Q9Y3B8 237 aaKnown RBP13.18□□□□□ -0.3
CNOT1-215ENST00000569020 PTRH2Q9Y3E5 179 aaKnown RBP13.18□□□□□ -0.3
CNOT1-215ENST00000569020 SEC16AO15027 2179 aa13.18□□□□□ -0.3
CNOT1-215ENST00000569020 ANKRD12Q6UB98 2062 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 NAV2Q8IVL1 2488 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 PCM1Q15154 2024 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 HEATR9A2RTY3 570 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 CCDC162PA2VCL2 907 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 ERI2A8K979 691 aaKnown RBP13.17□□□□□ -0.3
CNOT1-215ENST00000569020 TCP11X1B4DZS4 312 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 H3BMH7 237 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 ALPPP05187 535 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 TPBGLP0DKB5 382 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 PSMA3P25788 255 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 KLF1Q13351 362 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-215ENST00000569020 ESPL1Q14674 2120 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 KIR2DS3Q14952 304 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 ZIC1Q15915 447 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 SLC5A12Q1EHB4 618 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 CCDC38Q502W7 563 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 PRR30Q53SZ7 412 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-215ENST00000569020 VWA5B1Q5TIE3 1220 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 NAPRTQ6XQN6 538 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 MRGPREQ86SM8 312 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 TXLNBQ8N3L3 684 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 ZNF655Q8N720 491 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-215ENST00000569020 FLVCR1-AS1Q8TAF5 88 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 SLC35B2Q8TB61 432 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 PTERQ96BW5 349 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 GBP5Q96PP8 586 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 NDC1Q9BTX1 674 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 TSSK1BQ9BXA7 367 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 IMPACTQ9P2X3 320 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 DHCR7Q9UBM7 475 aaKnown RBP13.17□□□□□ -0.3
CNOT1-215ENST00000569020 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 MAST4O15021 2626 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 FLNCQ14315 2725 aa13.17□□□□□ -0.3
CNOT1-215ENST00000569020 BHMG1C9JSJ3 638 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-215ENST00000569020 HCRTR1O43613 425 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 SEMA7AO75326 666 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 IPO13O94829 963 aaKnown RBP13.16□□□□□ -0.3
CNOT1-215ENST00000569020 GOT2P00505 430 aaKnown RBP13.16□□□□□ -0.3
CNOT1-215ENST00000569020 STIP1P31948 543 aaKnown RBP13.16□□□□□ -0.3
CNOT1-215ENST00000569020 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-215ENST00000569020 KIF5AQ12840 1032 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 SLC9A5Q14940 896 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 DNAJC21Q5F1R6 531 aaKnown RBP13.16□□□□□ -0.3
CNOT1-215ENST00000569020 DCAF10Q5QP82 559 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 AFTPHQ6ULP2 937 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 PPP1R21Q6ZMI0 780 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 IQCKQ8N0W5 287 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 GALNT16Q8N428 558 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 DNAJC22Q8N4W6 341 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 OR13J1Q8NGT2 312 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 OR2Y1Q8NGV0 311 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 PRR7Q8TB68 274 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 HDAC10Q969S8 669 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 CASS4Q9NQ75 786 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 ANAPC5Q9UJX4 755 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 PLAGL1Q9UM63 463 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 CDYLQ9Y232 598 aa13.16□□□□□ -0.3
CNOT1-215ENST00000569020 R3HDM2Q9Y2K5 976 aaKnown RBP13.16□□□□□ -0.3
CNOT1-215ENST00000569020 E7EVH7 732 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 OR1I1O60431 355 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 FTCDO95954 541 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 RPN2P04844 631 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 ALAS2P22557 587 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 FDFT1P37268 417 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 RAB28P51157 221 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 ARSFP54793 590 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 CSE1LP55060 971 aaKnown RBP13.15□□□□□ -0.3
CNOT1-215ENST00000569020 PRAMEP78395 509 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 HSPA14Q0VDF9 509 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 MRPL49Q13405 166 aaKnown RBP13.15□□□□□ -0.3
CNOT1-215ENST00000569020 MYBPC3Q14896 1274 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 CYP2A13Q16696 494 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 EIF2S3LQ2VIR3 472 aaKnown RBP13.15□□□□□ -0.3
CNOT1-215ENST00000569020 NKAIN1Q4KMZ8 207 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 FASTKD1Q53R41 847 aaKnown RBP13.15□□□□□ -0.3
CNOT1-215ENST00000569020 TSTD2Q5T7W7 516 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 MRPL14Q6P1L8 145 aaKnown RBP13.15□□□□□ -0.3
CNOT1-215ENST00000569020 SLC22A15Q8IZD6 547 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 OR4L1Q8NH43 312 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 TM9SF4Q92544 642 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 DLG3Q92796 817 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 SLC22A18Q96BI1 424 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 RANBP9Q96S59 729 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 P4HTMQ9NXG6 502 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.15□□□□□ -0.3
CNOT1-215ENST00000569020 RIMKLBQ9ULI2 386 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 B3GNT3Q9Y2A9 372 aa13.15□□□□□ -0.3
CNOT1-215ENST00000569020 TCRBV7S2A1N4TA0A589 114 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 SUN1O94901 812 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 DDAH2O95865 285 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 APOA4P06727 396 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 CTSBP07858 339 aa13.14□□□□□ -0.31
CNOT1-215ENST00000569020 PIM1P11309 404 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms