RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 CYP2A6P11509 494 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 MTHFD1P11586 935 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF30P17039 623 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 CTPS1P17812 591 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 POLR2EP19388 210 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 FPR1P21462 350 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 CRHBPP24387 322 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ACRV1P26436 265 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 IL12AP29459 219 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 DNAJA1P31689 397 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 GGT5P36269 586 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 HNF4AP41235 474 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 AFF1P51825 1210 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 FOXA1P55317 472 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ERVPABLB-1P60509 514 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 OLR1P78380 273 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 TIAL1Q01085 375 aaKnown RBP eCLIP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 GSTM4Q03013 218 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 TRAF2Q12933 501 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 NFATC3Q12968 1075 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PMS2P3Q13401 168 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 NFATC2Q13469 925 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 VEZF1Q14119 521 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 BOP1Q14137 746 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 TRIM16LQ309B1 348 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 TIMM50Q3ZCQ8 353 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PITRM1Q5JRX3 1037 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PAGE3Q5JUK9 113 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 CLLU1OSQ5K130 101 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 CTSL3PQ5NE16 218 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 LIPJQ5W064 366 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 NADSYN1Q6IA69 706 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 NEK5Q6P3R8 708 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 KLHL35Q6PF15 583 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 SHQ1Q6PI26 577 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 DLEU7Q6UYE1 221 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PRR23CQ6ZRP0 262 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 Q6ZSR9 355 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 SERPINA9Q86WD7 417 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF280BQ86YH2 543 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ANKRD13BQ86YJ7 626 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 EPHX4Q8IUS5 362 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 DENND1CQ8IV53 801 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 RAVER1Q8IY67 606 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 KIAA2013Q8IYS2 634 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 DEPDC4Q8N2C3 294 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF548Q8NEK5 533 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 OR7D4Q8NG98 312 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 OR7A2PQ8NGA2 310 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 GRIN3AQ8TCU5 1115 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 GIPC3Q8TF64 312 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 SELENOMQ8WWX9 145 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 USP7Q93009 1102 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 MYDGFQ969H8 173 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 VMP1Q96GC9 406 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PLEKHA8Q96JA3 519 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PPM1MQ96MI6 270 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 FOPNLQ96NB1 174 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ZNF583Q96ND8 569 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 MUS81Q96NY9 551 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 KCNA7Q96RP8 456 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 LYSMD1Q96S90 227 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 RACGAP1Q9H0H5 632 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 IRAK4Q9NWZ3 460 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ZDHHC3Q9NYG2 299 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 CACNG4Q9UBN1 327 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 FAM8A1Q9UBU6 413 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 KLQ9UEF7 1012 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PCDHGB4Q9UN71 923 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 RUVBL1Q9Y265 456 aaKnown RBP7.47□□□□□ -1.21
ATXN3-250ENST00000568290 PCDHB9Q9Y5E1 797 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 A3GALT2U3KPV4 340 aa7.47□□□□□ -1.21
ATXN3-250ENST00000568290 ANKRD36A6QL64 1941 aa7.46□□□□□ -1.21
ATXN3-250ENST00000568290 PTPRDP23468 1912 aa7.46□□□□□ -1.21
ATXN3-250ENST00000568290 C1orf232A0A0U1RR37 186 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 ISPDA4D126 451 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 FAM149AA5PLN7 773 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 A8MVJ9 347 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 MANBAO00462 879 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 RFXANKO14593 260 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 ADAMDEC1O15204 470 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 FZD6O60353 706 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 NDUFS2O75306 463 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 STC2O76061 302 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 PRKD3O94806 890 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 SNAP29O95721 258 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 ANGPTL1O95841 491 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 TBX18O95935 607 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 TRBC1P01850 177 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 FABP3P05413 133 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 ITGB1P05556 798 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 F7P08709 466 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-250ENST00000568290 GSTM1P09488 218 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 PORP16435 677 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-250ENST00000568290 IGFBP5P24593 272 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 OXTRP30559 389 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 KRT20P35900 424 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 HPCAL1P37235 193 aa7.46□□□□□ -1.22
ATXN3-250ENST00000568290 KIR3DL1P43629 444 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms