RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CNDP1Q96KN2 507 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 SENP8Q96LD8 212 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ZNF570Q96NI8 536 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PPP1R10Q96QC0 940 aaKnown RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 FCRL5Q96RD9 977 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 NR1H4Q96RI1 486 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 HAPLN3Q96S86 360 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 LGMNQ99538 433 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ZNF184Q99676 751 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 SYT15Q9BQS2 421 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 KIFC1Q9BW19 673 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 COLEC11Q9BWP8 271 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ILKAPQ9H0C8 392 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 RHOJQ9H4E5 214 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 WDCPQ9H6R7 721 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 NMRAL1Q9HBL8 299 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 GALNT9Q9HCQ5 603 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TRPC7Q9HCX4 862 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 DMAP1Q9NPF5 467 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ENTPD7Q9NQZ7 604 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 MAN1C1Q9NR34 630 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 FBXO6Q9NRD1 293 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 SNX15Q9NRS6 342 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 IL1RAPL1Q9NZN1 696 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 JKAMPQ9P055 326 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 C11orf21Q9P2W6 132 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 GMEB2Q9UKD1 530 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ARHGAP26Q9UNA1 814 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 DNAJC16Q9Y2G8 782 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 NME7Q9Y5B8 376 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 PCDHB1Q9Y5F3 818 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TRPV2Q9Y5S1 764 aa5.25□□□□□ -1.57
CAPN3-217ENST00000567817 ASH1LQ9NR48 2969 aaKnown RBP5.25□□□□□ -1.57
CAPN3-217ENST00000567817 TTC3P53804 2025 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 FRYLO94915 3013 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 A0A096LPK6 155 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 CCDC78A2IDD5 438 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 MAGEA13PA6NCF6 341 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ARHGAP42A6NI28 874 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 HDAC3O15379 428 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 CCNT2O60583 730 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 TADA2AO75478 443 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 DDHD2O94830 711 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 HSPA4LO95757 839 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 PENKP01210 267 aaPredicted RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 CD1AP06126 327 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 THRAP10827 490 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ITGAMP11215 1152 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 FGF3P11487 239 aaPredicted RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 AKAP5P24588 427 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 TKTP29401 623 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 HOXC13P31276 330 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 CCR1P32246 355 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 SLC26A3P40879 764 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 GEMP55040 296 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 MAP3K7CLP57077 242 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 NAA20P61599 178 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 TSPY1Q01534 308 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 BTKQ06187 659 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 GRIK3Q13003 919 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 NME3Q13232 169 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 SLC12A1Q13621 1099 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 RCN2Q14257 317 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 PCLAFQ15004 111 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 HERC3Q15034 1050 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 MAPRE2Q15555 327 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ANKRD20A4Q4UJ75 823 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 KHDC1Q4VXA5 237 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ACSBG2Q5FVE4 666 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 MDH1BQ5I0G3 518 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ATAT1Q5SQI0 421 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 TEDDM1Q5T9Z0 273 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 OTUD1Q5VV17 481 aaPredicted RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 LIPMQ5VYY2 423 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 WSCD1Q658N2 575 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 CAPRIN2Q6IMN6 1127 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ZFP1Q6P2D0 407 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 FAM171BQ6P995 826 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 C16orf89Q6UX73 402 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ZYG11AQ6WRX3 759 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 LRRC74BQ6ZQY2 392 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 PIWIL4Q7Z3Z4 852 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 MRPL10Q7Z7H8 261 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ZBTB46Q86UZ6 589 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 KCNMB4Q86W47 210 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 THEM5Q8N1Q8 247 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 MPP5Q8N3R9 675 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ATPAF2Q8N5M1 289 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 RBM15BQ8NDT2 890 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 CATSPER1Q8NEC5 780 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 PPHLN1Q8NEY8 458 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 VN1R2Q8NFZ6 395 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 URGCPQ8TCY9 931 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 ACTRT2Q8TDY3 377 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 CLEC4CQ8WTT0 213 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 RSPH1Q8WYR4 309 aa5.24□□□□□ -1.57
CAPN3-217ENST00000567817 MARS2Q96GW9 593 aaKnown RBP5.24□□□□□ -1.57
CAPN3-217ENST00000567817 PCED1BQ96HM7 432 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms