RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SPHK1Q9NYA1 384 aa12.03□□□□□ -0.48
RNF40-211ENST00000567365 OR6C2Q9NZP2 312 aa12.03□□□□□ -0.48
RNF40-211ENST00000567365 MTRF1LQ9UGC7 380 aaKnown RBP12.03□□□□□ -0.48
RNF40-211ENST00000567365 TRMT6Q9UJA5 497 aaKnown RBP12.03□□□□□ -0.48
RNF40-211ENST00000567365 ACSL6Q9UKU0 697 aa12.03□□□□□ -0.48
RNF40-211ENST00000567365 NFU1Q9UMS0 254 aa12.03□□□□□ -0.48
RNF40-211ENST00000567365 PCDHGA7Q9Y5G6 932 aa12.03□□□□□ -0.48
RNF40-211ENST00000567365 PCDHGA3Q9Y5H0 932 aa12.03□□□□□ -0.48
RNF40-211ENST00000567365 URB1O60287 2271 aaKnown RBP12.03□□□□□ -0.48
RNF40-211ENST00000567365 FAM95CA0A1B0GW59 222 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 KRT87PA6NCN2 255 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 TLCD2A6NGC4 264 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 MYO1CO00159 1063 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 MATN2O00339 956 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 RASGRF2O14827 1237 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 TLX3O43711 291 aaPredicted RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 NELFEP18615 380 aaKnown RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 MCM3P25205 808 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 PRDX3P30048 256 aaKnown RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 GP5P40197 560 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 CCNFP41002 786 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 CSRP3P50461 194 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 TAS2R39P59534 338 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 ERVPABLB-1P60509 514 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 MC2RQ01718 297 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 ILF2Q12905 390 aaKnown RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 TBC1D25Q3MII6 688 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 SNAP47Q5SQN1 464 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 IRGCQ6NXR0 463 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 CEP128Q6ZU80 1094 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 PIWIL4Q7Z3Z4 852 aaKnown RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 PROSER1Q86XN7 944 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 IFT20Q8IY31 132 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 CFAP61Q8NHU2 1237 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 SNIP1Q8TAD8 396 aaKnown RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 EEF1AKMT1Q8WVE0 214 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 UBXN4Q92575 508 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 PMEPA1Q969W9 287 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 ZNF578Q96N58 590 aaPredicted RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 GPR22Q99680 433 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 RBBP8Q99708 897 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 MAP3K3Q99759 626 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 RHOXF2Q9BQY4 288 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 SPRY4Q9C004 299 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 CCDC86Q9H6F5 360 aaKnown RBP12.02□□□□□ -0.49
RNF40-211ENST00000567365 PLAGL1Q9UM63 463 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 BTRCQ9Y297 605 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 CACNA1GO43497 2377 aa12.02□□□□□ -0.49
RNF40-211ENST00000567365 SDK2Q58EX2 2172 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 A0A1W2PPV9 198 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 HMX2A2RU54 273 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 A8MU76 341 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 C9orf172C9J069 976 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 NVLO15381 856 aaKnown RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 TNFSF15O95150 251 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 CHRM5P08912 532 aaPredicted RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 MYBL2P10244 700 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 ZNF37AP17032 561 aaPredicted RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 TNFRSF8P28908 595 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 STX2P32856 288 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 CSTF2P33240 577 aaKnown RBP eCLIP12.01□□□□□ -0.49
RNF40-211ENST00000567365 BDKRB1P46663 353 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 NAB1Q13506 487 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 EFTUD2Q15029 972 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■■■■ 32.7
RNF40-211ENST00000567365 ZKSCAN8Q15776 578 aaPredicted RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 CYP2A13Q16696 494 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 DNTTIP2Q5QJE6 756 aaKnown RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 CACHD1Q5VU97 1274 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 LRRC8EQ6NSJ5 796 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 UGT3A1Q6NUS8 523 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 FAM92BQ6ZTR7 304 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 KMT5CQ86Y97 462 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 CEP97Q8IW35 865 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 LRRC56Q8IYG6 542 aaPredicted RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 D2HGDHQ8N465 521 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 GPATCH11Q8N954 259 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 LMNTD1Q8N9Z9 388 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 OR2L8Q8NGY9 312 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 CDKL2Q92772 493 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 IL17FQ96PD4 163 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 OR2A14Q96R47 310 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 CHRNA10Q9GZZ6 450 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 EPB41L4BQ9H329 900 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 ACSS3Q9H6R3 686 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 FBXO8Q9NRD0 319 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 C1GALT1Q9NS00 363 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 ACTR10Q9NZ32 417 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 PISDQ9UG56 409 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 KLHL3Q9UH77 587 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 CIDEBQ9UHD4 219 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 TDRKHQ9Y2W6 561 aaKnown RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 MTO1Q9Y2Z2 717 aaKnown RBP12.01□□□□□ -0.49
RNF40-211ENST00000567365 AK5Q9Y6K8 562 aa12.01□□□□□ -0.49
RNF40-211ENST00000567365 PIPSLA2A3N6 862 aa12□□□□□ -0.49
RNF40-211ENST00000567365 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12□□□□□ -0.49
RNF40-211ENST00000567365 FAM155BO75949 473 aa12□□□□□ -0.49
RNF40-211ENST00000567365 FAM153BP0C7A2 387 aa12□□□□□ -0.49
RNF40-211ENST00000567365 MSL3P1P0C860 447 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms