RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 SLC17A6Q9P2U8 582 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PHF11Q9UIL8 331 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DAGLAQ9Y4D2 1042 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GMPPBQ9Y5P6 360 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RGPD5Q99666 1765 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 APOC4-APOC2K7ER74 178 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 UBXN8O00124 270 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SSNA1O43805 119 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 APOC2P02655 101 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ITGAMP11215 1152 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 KELP23276 732 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ALDH4A1P30038 563 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TGM4P49221 684 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ISL1P61371 349 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ERVK-21P61565 698 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.86□□□□□ -1.95
CHD9-218ENST00000566029 DSG2Q14126 1118 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 BCL7AQ4VC05 210 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DALRD3Q5D0E6 543 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 COQ5Q5HYK3 327 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 GARNL3Q5VVW2 1013 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FAM45BPQ6NSW5 357 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CHST15Q7LFX5 561 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 SPPL2CQ8IUH8 684 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MAPKAPK5Q8IW41 473 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 C3orf58Q8NDZ4 430 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FAM45AQ8TCE6 357 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC9A6Q92581 669 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LPAR1Q92633 364 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TMEM125Q96AQ2 219 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 C18orf25Q96B23 403 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC10A4Q96EP9 437 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 C1QTNF1Q9BXJ1 281 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 UGT2B28Q9BY64 529 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZNF518BQ9C0D4 1074 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 UPF3AQ9H1J1 476 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 MIR1-1HGQ9H1L0 117 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ACAD9Q9H845 621 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NGRNQ9NPE2 291 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC39A1Q9NY26 324 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 MTMR4Q9NYA4 1195 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PCDHGA9Q9Y5G4 932 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 PCDHGA1Q9Y5H4 931 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLIT2O94813 1529 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 COL1A2P08123 1366 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 A0A0B4J293 547 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TLL1O43897 1013 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SCAF4O95104 1147 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 LTFP02788 710 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TFE3P19532 575 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 CAPN3P20807 821 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RYKP34925 604 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 KCNC1P48547 511 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FPGSQ05932 587 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 FAM209BQ5JX69 171 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SUSD4Q5VX71 490 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PSRC1Q6PGN9 363 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 FAM35AQ86V20 835 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TXNDC5Q8NBS9 432 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 KCTD6Q8NC69 237 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ST8SIA2Q92186 375 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 UFD1Q92890 307 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 SPACA7Q96KW9 195 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 IL17BQ9UHF5 180 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ADGRE2Q9UHX3 823 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TRMT6Q9UJA5 497 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 HACD1B0YJ81 288 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 LINC01387J3KSC0 135 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 OGTO15294 1046 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 IL2RBP14784 551 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RGS6P49758 472 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ATXN1P54253 815 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 SLC35A2P78381 396 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 POU6F2P78424 691 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 EMX1Q04741 257 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 LIPEQ05469 1076 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CREB3L2Q70SY1 520 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NOXA1Q86UR1 476 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 METTL23Q86XA0 190 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CLP1Q92989 425 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 FUBP1Q96AE4 644 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 ZBTB18Q99592 522 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 BARD1Q99728 777 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 INTS7Q9NVH2 962 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 FAM118AQ9NWS6 357 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 COL20A1Q9P218 1284 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 DNAJB9Q9UBS3 223 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 PDE10AQ9Y233 779 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 CRYL1Q9Y2S2 319 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 TRPC5OSA6NMA1 111 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 BBIP1A8MTZ0 92 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 E5RI56 91 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 EEF2KO00418 725 aaKnown RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 MITFO75030 526 aaPredicted RBP2.86□□□□□ -1.95
CHD9-218ENST00000566029 PNPP00491 289 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 RBP1P09455 135 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ALAS2P22557 587 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 ETV1P50549 477 aa2.86□□□□□ -1.95
CHD9-218ENST00000566029 NFYCQ13952 458 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms