RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TPBGLP0DKB5 382 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 UGT2B7P16662 529 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 ARNTP27540 789 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 SHMT2P34897 504 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 CCR10P46092 362 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 RPS18P62269 152 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 PLOD1Q02809 727 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 CKAP4Q07065 602 aaKnown RBP13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 C2orf54Q08AI8 447 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 WHAMMP3Q1A5X7 153 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 IZUMO3Q5VZ72 239 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 SPESP1Q6UW49 350 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 PRICKLE2Q7Z3G6 844 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 SDCCAG8Q86SQ7 713 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 OR1L3Q8NH93 324 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 OR5K2Q8NHB8 316 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 GSDMBQ8TAX9 411 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 N4BP2L2Q92802 583 aaPredicted RBP13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 CLIP3Q96DZ5 547 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 TRAPPC9Q96Q05 1148 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 SAMD15Q9P1V8 674 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 POLG2Q9UHN1 485 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 BTRCQ9Y297 605 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 CRYL1Q9Y2S2 319 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 PCDHB3Q9Y5E6 796 aa13.19□□□□□ -0.3
VPS9D1-204ENST00000565023 MAGEB16A2A368 324 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 FAM187AA6NFU0 413 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 SMAPO00193 183 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 TP73O15350 636 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 CPNE3O75131 537 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 NIPSNAP2O75323 286 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 SEC31AO94979 1220 aaKnown RBP13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 CYP2A7P20853 494 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 BDKRB1P46663 353 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 POLE2P56282 527 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 MC1RQ01726 317 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 GPS2Q13227 327 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 MORF4L2Q15014 288 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 CTSL3PQ5NE16 218 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 MAATS1Q7Z4T9 603 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 TMEM135Q86UB9 458 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 SLC22A15Q8IZD6 547 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 AGGF1Q8N302 714 aaeCLIP13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 ASZ1Q8WWH4 475 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 ZNF592Q92610 1267 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 SIGLEC10Q96LC7 697 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 PANX3Q96QZ0 392 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 FAM117AQ9C073 453 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 TWSG1Q9GZX9 223 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 P2RY12Q9H244 342 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 IRAK4Q9NWZ3 460 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 CDYLQ9Y232 598 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 KLHL20Q9Y2M5 609 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 HEMK1Q9Y5R4 338 aaPredicted RBP13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 NFS1Q9Y697 457 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 MAD1L1Q9Y6D9 718 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 PTPN13Q12923 2485 aa13.18□□□□□ -0.3
VPS9D1-204ENST00000565023 PIEZO2Q9H5I5 2752 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 CCDC88CQ9P219 2028 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 FAM237BA0A1B0GVD1 139 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 KRT87PA6NCN2 255 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 B8ZZF3 427 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 RAD51CO43502 376 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 SLC28A2O43868 658 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 FURINP09958 794 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 PLA2G2AP14555 144 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 PAMP19021 973 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 AOAHP28039 575 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 PEBP1P30086 187 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 MRPS25P82663 173 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 PTCHD3Q3KNS1 767 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 DNAJC21Q5F1R6 531 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 KIAA0930Q6ICG6 404 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 MRNIPQ6NTE8 343 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 HIBCHQ6NVY1 386 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 CNSTQ6PJW8 725 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 CDHR3Q6ZTQ4 885 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 OTOAQ7RTW8 1153 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 BPHLQ86WA6 291 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 PTRH1Q86Y79 214 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 SPNS2Q8IVW8 549 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 CARFQ8N187 725 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 C19orf47Q8N9M1 422 aaKnown RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 SLC38A9Q8NBW4 561 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 KIF18AQ8NI77 898 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 SNF8Q96H20 258 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 CATSPER2Q96P56 530 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 OR2A14Q96R47 310 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 ERP44Q9BS26 406 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 CHST8Q9H2A9 424 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 ACTR5Q9H9F9 607 aaPredicted RBP13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 FAM60AQ9NP50 221 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 KCND3Q9UK17 655 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 SLC39A10Q9ULF5 831 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 MRFAP1Q9Y605 127 aa13.17□□□□□ -0.3
VPS9D1-204ENST00000565023 COL12A1Q99715 3063 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 A0A0J9YY10 115 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 EFCAB8A8MWE9 144 aa13.16□□□□□ -0.3
VPS9D1-204ENST00000565023 KDM1AO60341 852 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms