RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 FZD3Q9NPG1 666 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GULP1Q9UBP9 304 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PLCL2Q9UPR0 1127 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ENTPD4Q9Y227 616 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TEX264Q9Y6I9 313 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 APOC4-APOC2K7ER74 178 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 LINC01565O15544 149 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MRPS14O60783 128 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 GATBO75879 557 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 APOC2P02655 101 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 T-ENOLP0DO92 83 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MMP13P45452 471 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 POU4F2Q12837 409 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 EIF4EBP2Q13542 120 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 GRM2Q14416 872 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PARP15Q460N3 678 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 KHDC1Q4VXA5 237 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 TSTD2Q5T7W7 516 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PPP2R2DQ66LE6 453 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ZNF470Q6ECI4 717 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 KLHL17Q6TDP4 642 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TAS2R42Q7RTR8 314 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 NUDCD3Q8IVD9 361 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 BADQ92934 168 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 BMFQ96LC9 184 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DHRS1Q96LJ7 313 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TRAPPC9Q96Q05 1148 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 NMRAL1Q9HBL8 299 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 HMX1Q9NP08 348 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 ANAPC2Q9UJX6 822 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PNMA8BQ9ULN7 279 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 CDC14AQ9UNH5 594 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 WNT6Q9Y6F9 365 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 A0A0G2JN53 185 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 C1QTNF3-AMACRE9PGA6 284 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ACSL4O60488 711 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 LRATO95237 230 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 IFNGP01579 166 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CD2P06729 351 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ALOX5P09917 674 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MAP2K6P52564 334 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ATP6V0D1P61421 351 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 FAM189BP81408 668 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GRIK2Q13002 908 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GALNTL6Q49A17 601 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MS4A13Q5J8X5 152 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TMEM164Q5U3C3 297 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 LCN1P1Q5VSP4 162 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ANKRD34AQ69YU3 496 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 BRAT1Q6PJG6 821 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DNM1P34Q6PK57 102 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TRAF7Q6Q0C0 670 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 C5orf46Q6UWT4 87 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 HSDL2Q6YN16 418 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 LHFPL3Q86UP9 236 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 MYRFLQ96LU7 910 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CASD1Q96PB1 797 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 YME1L1Q96TA2 773 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 RPP25Q9BUL9 199 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 BBS2Q9BXC9 721 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TRIM2Q9C040 744 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 WDR12Q9GZL7 423 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 POLR2J2Q9GZM3 115 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 POLR2J3Q9H1A7 115 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 EMCNQ9ULC0 261 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 OR5K4A6NMS3 321 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SNX3O60493 162 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 RFPL1O75677 317 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ICAM2P13598 275 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 HPGDP15428 266 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 LRPAP1P30533 357 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GRK5P34947 590 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 EIF2B2P49770 351 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 CDKN2DP55273 166 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 VBP1P61758 197 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 DDX39BQ13838 428 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 NDUFAF6Q330K2 333 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PDSS1Q5T2R2 415 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PET117Q6UWS5 81 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GK5Q6ZS86 529 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ZNF467Q7Z7K2 595 aaPredicted RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC26A11Q86WA9 606 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TIGD4Q8IY51 512 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 METTL25Q8N6Q8 603 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ANKFN1Q8N957 763 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PAPD5Q8NDF8 572 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 PIWIL2Q8TC59 973 aaKnown RBP3.29□□□□□ -1.88
CHD9-213ENST00000564845 EID2BQ96D98 161 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC38A2Q96QD8 506 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 SLC7A5P2Q9GIP4 190 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ANKRA2Q9H9E1 313 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 NOD2Q9HC29 1040 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 USE1Q9NZ43 259 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GNPTGQ9UJJ9 305 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 TMEM202A6NGA9 273 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 GMFGO60234 142 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CYP7B1O75881 506 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 PGM3O95394 542 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 CKMP06732 381 aa3.29□□□□□ -1.88
CHD9-213ENST00000564845 ADH1AP07327 375 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms