RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 RNF187Q5TA31 235 aaPredicted RBP18.36■□□□□ 0.53
NME3-207ENST00000564628 CACHD1Q5VU97 1274 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 NEPROQ6NW34 567 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 DUS1LQ6P1R4 473 aaKnown RBP18.36■□□□□ 0.53
NME3-207ENST00000564628 CILP2Q8IUL8 1156 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 LKAAEAR1Q8TD35 194 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 RSC1A1Q92681 617 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 FCRL4Q96PJ5 515 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 EBNA1BP2Q99848 306 aaKnown RBP18.36■□□□□ 0.53
NME3-207ENST00000564628 TWSG1Q9GZX9 223 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 LRRC4CQ9HCJ2 640 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 LHX9Q9NQ69 397 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 SEMA5BQ9P283 1151 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 CFAP20Q9Y6A4 193 aaKnown RBP18.36■□□□□ 0.53
NME3-207ENST00000564628 MAD1L1Q9Y6D9 718 aa18.36■□□□□ 0.53
NME3-207ENST00000564628 PIPSLA2A3N6 862 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 KIF1CO43896 1103 aaKnown RBP18.35■□□□□ 0.53
NME3-207ENST00000564628 NDUFS3O75489 264 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 BANF1O75531 89 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 ADARP55265 1226 aaKnown RBP18.35■□□□□ 0.53
NME3-207ENST00000564628 PLOD1Q02809 727 aaPredicted RBP18.35■□□□□ 0.53
NME3-207ENST00000564628 CRYMQ14894 314 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 C4orf17Q53FE4 359 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 CTSL3PQ5NE16 218 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 CENPUQ71F23 418 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 MAATS1Q7Z4T9 603 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 SDCCAG8Q86SQ7 713 aaPredicted RBP18.35■□□□□ 0.53
NME3-207ENST00000564628 ELMO1Q92556 727 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 ELMO2Q96JJ3 720 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 BIRC8Q96P09 236 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 WDR83Q9BRX9 315 aaKnown RBP18.35■□□□□ 0.53
NME3-207ENST00000564628 ERP44Q9BS26 406 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 NAT9Q9BTE0 207 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 KIR3DX1Q9H7L2 352 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 PDE7BQ9NP56 450 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 IL1RAPL1Q9NZN1 696 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 HEBP2Q9Y5Z4 205 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 FAM169AQ9Y6X4 670 aa18.35■□□□□ 0.53
NME3-207ENST00000564628 SPTAN1Q13813 2472 aaKnown RBP18.34■□□□□ 0.53
NME3-207ENST00000564628 BHMG1C9JSJ3 638 aaPredicted RBP18.34■□□□□ 0.53
NME3-207ENST00000564628 TTC4O95801 387 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 ACADLP28330 430 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 NDUFS1P28331 727 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 CCR7P32248 378 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 MRPS25P82663 173 aaKnown RBP18.34■□□□□ 0.53
NME3-207ENST00000564628 LONRF1Q17RB8 773 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 TEX35Q5T0J7 233 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 FAM92BQ6ZTR7 304 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 BPHLQ86WA6 291 aaPredicted RBP18.34■□□□□ 0.53
NME3-207ENST00000564628 IGDCC3Q8IVU1 814 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 LMNTD2Q8IXW0 634 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 PDIK1LQ8N165 341 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 OTUD6BQ8N6M0 293 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 GALNT11Q8NCW6 608 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 CT55Q8WUE5 264 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 PWWP2AQ96N64 755 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 TSSK1BQ9BXA7 367 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 GPR87Q9BY21 358 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 TRIM31Q9BZY9 425 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 PLAC1Q9HBJ0 212 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 INTS10Q9NVR2 710 aaKnown RBP18.34■□□□□ 0.53
NME3-207ENST00000564628 SLC24A2Q9UI40 661 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 GNPTGQ9UJJ9 305 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 CDYLQ9Y232 598 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 SNX24Q9Y343 169 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 TEX264Q9Y6I9 313 aa18.34■□□□□ 0.53
NME3-207ENST00000564628 UTP20O75691 2785 aaKnown RBP18.33■□□□□ 0.53
NME3-207ENST00000564628 IQCF5A8MTL0 148 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 E7ESA3 106 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 NDC80O14777 642 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 CTIFO43310 598 aaKnown RBP18.33■□□□□ 0.52
NME3-207ENST00000564628 VPS4BO75351 444 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 GPC4O75487 556 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 S1PR4O95977 384 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 TUBBP07437 444 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 AOAHP28039 575 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 BOP1Q14137 746 aaKnown RBP18.33■□□□□ 0.52
NME3-207ENST00000564628 HIF1AQ16665 826 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 BBS9Q3SYG4 887 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 DUPD1Q68J44 220 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 ZNF470Q6ECI4 717 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 IRGCQ6NXR0 463 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 ZNF449Q6P9G9 518 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 SLC22A15Q8IZD6 547 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.33■□□□□ 0.52
NME3-207ENST00000564628 BBOF1Q8ND07 529 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 THAP4Q8WY91 577 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 LRRC39Q96DD0 335 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 RNF31Q96EP0 1072 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 SLC41A2Q96JW4 573 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 ACTL8Q9H568 366 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 MVB12BQ9H7P6 319 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 WHRNQ9P202 907 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 RARRES3Q9UL19 164 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 VPS4AQ9UN37 437 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 VPS9D1Q9Y2B5 631 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 COLEC10Q9Y6Z7 277 aa18.33■□□□□ 0.52
NME3-207ENST00000564628 UBA6A0AVT1 1052 aaPredicted RBP18.32■□□□□ 0.52
NME3-207ENST00000564628 IFRD1O00458 451 aaPredicted RBP18.32■□□□□ 0.52
NME3-207ENST00000564628 PFDN6O15212 129 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms