RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 FGF21Q9NSA1 209 aa12.98□□□□□ -0.33
CLK3-216ENST00000564468 KLHL42Q9P2K6 505 aa12.98□□□□□ -0.33
CLK3-216ENST00000564468 FBXO5Q9UKT4 447 aa12.98□□□□□ -0.33
CLK3-216ENST00000564468 SLC39A10Q9ULF5 831 aa12.98□□□□□ -0.33
CLK3-216ENST00000564468 ICKQ9UPZ9 632 aa12.98□□□□□ -0.33
CLK3-216ENST00000564468 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 FANCGO15287 622 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 SPAG6O75602 509 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 CHRM5P08912 532 aaPredicted RBP12.97□□□□□ -0.33
CLK3-216ENST00000564468 CCNYL3P0C7X3 344 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 FOLR1P15328 257 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 SLC1A2P43004 574 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 TUBB4BP68371 445 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 CALCOCO2Q13137 446 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 CTBP1Q13363 440 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 TUBB2AQ13885 445 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 HSP90AA5PQ58FG0 334 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 UGT3A1Q6NUS8 523 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 SPESP1Q6UW49 350 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 DENND6AQ8IWF6 608 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 AGGF1Q8N302 714 aaeCLIP12.97□□□□□ -0.33
CLK3-216ENST00000564468 C17orf53Q8N3J3 647 aaPredicted RBP12.97□□□□□ -0.33
CLK3-216ENST00000564468 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 TUBB2BQ9BVA1 445 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 PITPNM3Q9BZ71 974 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 TRIM31Q9BZY9 425 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 FBXO6Q9NRD1 293 aaPredicted RBP12.97□□□□□ -0.33
CLK3-216ENST00000564468 IL1RAPL1Q9NZN1 696 aa12.97□□□□□ -0.33
CLK3-216ENST00000564468 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 ISM1B1AKI9 464 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 EFSO43281 561 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 KIAA0754O94854 1291 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 DLGAP3O95886 979 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 TUBB4AP04350 444 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 EBLN1P0CF75 366 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 PKLRP30613 574 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 ELK3P41970 407 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 CKAP4Q07065 602 aaKnown RBP12.96□□□□□ -0.33
CLK3-216ENST00000564468 GBX1Q14549 363 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 SLC5A12Q1EHB4 618 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 C6orf15Q6UXA7 325 aaPredicted RBP12.96□□□□□ -0.33
CLK3-216ENST00000564468 KIAA0408Q6ZU52 694 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 NEK10Q6ZWH5 1172 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 VASH2Q86V25 355 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 N4BP2L2Q92802 583 aaPredicted RBP12.96□□□□□ -0.33
CLK3-216ENST00000564468 KCNJ9Q92806 393 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 CERS2Q96G23 380 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 ELMO2Q96JJ3 720 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 TRAPPC9Q96Q05 1148 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 ERP44Q9BS26 406 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 GPN2Q9H9Y4 310 aaPredicted RBP12.96□□□□□ -0.33
CLK3-216ENST00000564468 FAM114A2Q9NRY5 505 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 IARS2Q9NSE4 1012 aaKnown RBP12.96□□□□□ -0.33
CLK3-216ENST00000564468 ZC3H7BQ9UGR2 993 aaKnown RBP12.96□□□□□ -0.33
CLK3-216ENST00000564468 LNPEPQ9UIQ6 1025 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 SERTAD3Q9UJW9 196 aa12.96□□□□□ -0.33
CLK3-216ENST00000564468 A0A0J9YY10 115 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 EIF3FO00303 357 aaPredicted RBP12.95□□□□□ -0.34
CLK3-216ENST00000564468 RASGRF2O14827 1237 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 VPS26AO75436 327 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 FKBP9O95302 570 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 C1orf105O95561 183 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 ENO3P13929 434 aaPredicted RBP12.95□□□□□ -0.34
CLK3-216ENST00000564468 ST6GAL1P15907 406 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 UGT2B7P16662 529 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 CD9P21926 228 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 KCNC4Q03721 635 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 KCNAB1Q14722 419 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 MSS51Q4VC12 460 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 ZNF789Q5FWF6 425 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 LRRC8EQ6NSJ5 796 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 GALNT7Q86SF2 657 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 C2CD4AQ8NCU7 369 aaPredicted RBP12.95□□□□□ -0.34
CLK3-216ENST00000564468 OR2L8Q8NGY9 312 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 INPP5DQ92835 1189 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 TCTN2Q96GX1 697 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 OR2A14Q96R47 310 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 CHRNA10Q9GZZ6 450 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 RAB17Q9H0T7 212 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 CLMPQ9H6B4 373 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 PPANQ9NQ55 473 aaKnown RBP12.95□□□□□ -0.34
CLK3-216ENST00000564468 INTS7Q9NVH2 962 aaKnown RBP12.95□□□□□ -0.34
CLK3-216ENST00000564468 WHRNQ9P202 907 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 PADI1Q9ULC6 663 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 CHMP2BQ9UQN3 213 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 SNX24Q9Y343 169 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 DHRS7Q9Y394 339 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 UTP11Q9Y3A2 253 aaKnown RBP12.95□□□□□ -0.34
CLK3-216ENST00000564468 TEX264Q9Y6I9 313 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 COL6A6A6NMZ7 2263 aa12.95□□□□□ -0.34
CLK3-216ENST00000564468 ZNF839A8K0R7 811 aa12.94□□□□□ -0.34
CLK3-216ENST00000564468 ZNF891A8MT65 544 aaPredicted RBP12.94□□□□□ -0.34
CLK3-216ENST00000564468 CPNE3O75131 537 aaKnown RBP12.94□□□□□ -0.34
CLK3-216ENST00000564468 HAUS5O94927 633 aa12.94□□□□□ -0.34
CLK3-216ENST00000564468 MATN4O95460 622 aa12.94□□□□□ -0.34
CLK3-216ENST00000564468 CATP04040 527 aaKnown RBP12.94□□□□□ -0.34
CLK3-216ENST00000564468 TPBGLP0DKB5 382 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms